RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TERB1Q8NA31 727 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 ANKRD52Q8NB46 1076 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 GSTCDQ8NEC7 633 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 BEST2Q8NFU1 509 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 FAM81AQ8TBF8 368 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 NTAN1Q96AB6 310 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CCDC126Q96EE4 140 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CERS2Q96G23 380 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 DUS3LQ96G46 650 aaKnown RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PRR11Q96HE9 360 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HIC2Q96JB3 615 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 LRGUKQ96M69 825 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CSPG4P5Q96PW8 444 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 TUBGCP5Q96RT8 1024 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 WRNIP1Q96S55 665 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SORT1Q99523 831 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 NDNQ99608 321 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 RBBP8Q99708 897 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 MECRQ9BV79 373 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 APOL6Q9BWW8 343 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 INO80BQ9C086 356 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SNX25Q9H3E2 840 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SMYD3Q9H7B4 428 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 EFCAB1Q9HAE3 211 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 TRPC7Q9HCX4 862 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 TCF7L2Q9NQB0 619 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF277Q9NRM2 450 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 DPP3Q9NY33 737 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 ERAP1Q9NZ08 941 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 GGA3Q9NZ52 723 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 DTLQ9NZJ0 730 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 STAP1Q9ULZ2 295 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HEY1Q9Y5J3 304 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 DOCK5Q9H7D0 1870 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PARP14Q460N5 1801 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 C15orf38-AP3S2A0A0A6YYH1 394 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 A0A1W2PP55 124 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 EME2A4GXA9 379 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ASB14A6NK59 587 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ZNF701M0R085 212 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 MATN2O00339 956 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CYB561D2O14569 222 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 NPHS1O60500 1241 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 RNASEH1O60930 286 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 AVILO75366 819 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 DAB1O75553 588 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 BCAS2O75934 225 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 FBXO21O94952 628 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 C22orf31O95567 290 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 METTL18O95568 372 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 AP2A1O95782 977 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CLPTM1O96005 669 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CD4P01730 458 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 NFICP08651 508 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 UBTFL6P0CB48 400 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CCDC166P0CW27 439 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 RAG1P15918 1043 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 YBX3P16989 372 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CES1P23141 567 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 MATKP42679 507 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ALDH1A3P47895 512 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CPA2P48052 419 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TKTL1P51854 596 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 HMGCS2P54868 508 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 DNAJB13P59910 316 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 NAA20P61599 178 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 RPL10AP62906 217 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TUBA4AP68366 448 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 IGBP1P78318 339 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 COG7P83436 770 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 FOLH1Q04609 750 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 GALNT1Q10472 559 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 SCAPQ12770 1279 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 IFRD2Q12894 506 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 BIRC2Q13490 618 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 BMPR2Q13873 1038 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CYLC2Q14093 348 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 UBAP2LQ14157 1087 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ADGRE1Q14246 886 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TTLL4Q14679 1199 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TAF5Q15542 800 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TRIP10Q15642 601 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 CNGA3Q16281 694 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 PSMD5Q16401 504 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 C15orf59Q2T9L4 293 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ANO4Q32M45 955 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 PEAR1Q5VY43 1037 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 LIPMQ5VYY2 423 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 SEL1L3Q68CR1 1132 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 NCBP2-AS2Q69YL0 99 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 SCYL2Q6P3W7 929 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 TRMT10BQ6PF06 316 aaKnown RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 ZYG11AQ6WRX3 759 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 HACD2Q6Y1H2 254 aa6.58□□□□□ -1.36
SNHG1-225ENST00000545920 BNC2Q6ZN30 1099 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-225ENST00000545920 RAPH1Q70E73 1250 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms