RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NUP93Q8N1F7 819 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 C7orf31Q8N865 590 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 DIS3LQ8TF46 1054 aaKnown RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 NTAN1Q96AB6 310 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 EME1Q96AY2 570 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 FAR2Q96K12 515 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 BIRC8Q96P09 236 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 UHRF1Q96T88 793 aaPredicted RBP8.89□□□□□ -0.99
TDP1-204ENST00000545686 UNC93B1Q9H1C4 597 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 DPEP3Q9H4B8 488 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 ZDHHC2Q9UIJ5 367 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 PACSIN3Q9UKS6 424 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 PCDHGB4Q9UN71 923 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 PCDHGB5Q9Y5G0 923 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CEPT1Q9Y6K0 416 aa8.89□□□□□ -0.99
TDP1-204ENST00000545686 CROCCQ5TZA2 2017 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 DNAJC25-GNG10A0A024R161 153 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 PPEF2O14830 753 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 CFLARO15519 480 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 PSMD3O43242 534 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 RNASEH2AO75792 299 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 AMHP03971 560 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 SLC35E2BP0CK96 405 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 SLC5A2P31639 672 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 KPNA2P52292 529 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 ZNF135P52742 658 aaPredicted RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 SULT2A1Q06520 285 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 TRIM25Q14258 630 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 TTLL4Q14679 1199 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 GRM3Q14832 879 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 SMAD1Q15797 465 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 MGAT5BQ3V5L5 792 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 NAPEPLDQ6IQ20 393 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 LRRC8EQ6NSJ5 796 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 IYDQ6PHW0 289 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 PIWIL4Q7Z3Z4 852 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 ERI1Q8IV48 349 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 CNTN4Q8IWV2 1026 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 KLHDC8BQ8IXV7 354 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 PELI3Q8N2H9 469 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 TSPAN14Q8NG11 270 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 GAB3Q8WWW8 586 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 USP13Q92995 863 aaPredicted RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 HDAC11Q96DB2 347 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 MFSD3Q96ES6 412 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 SLC2A13Q96QE2 648 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 IARS2Q9NSE4 1012 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 CHCHD3Q9NX63 227 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 RSL24D1Q9UHA3 163 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 IPO11Q9UI26 975 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 SLC39A10Q9ULF5 831 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 FAM155AB1AL88 458 aaPredicted RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 C9IYK1 514 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 H6PDO95479 791 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 TXNP10599 105 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 CD1EP15812 388 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 CDK9P50750 372 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 NAGLUP54802 743 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 DNAJB13P59910 316 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 IGBP1P78318 339 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 RHDQ02161 417 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 STX5Q13190 355 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 SEMA3BQ13214 749 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 ITGA7Q13683 1181 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 GK3PQ14409 553 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 PSMD5Q16401 504 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 C9orf57Q5W0N0 161 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 NXNQ6DKJ4 435 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 DHRS4L2Q6PKH6 230 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 MAMDC4Q6UXC1 1216 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 LINC00523Q86TU6 105 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 FBXO16Q8IX29 292 aaPredicted RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 GALNT4Q8N4A0 578 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 AFAP1L2Q8N4X5 818 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 KDM1BQ8NB78 822 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 CEP70Q8NHQ1 597 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 HM13Q8TCT9 377 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 WNT8BQ93098 351 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 DNAJC1Q96KC8 554 aaKnown RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 SCYL1Q96KG9 808 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 ZNF560Q96MR9 790 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 EFHD1Q9BUP0 239 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 MLPHQ9BV36 600 aaPredicted RBP8.88□□□□□ -0.99
TDP1-204ENST00000545686 KIFC1Q9BW19 673 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 PNPLA3Q9NST1 481 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 GDAP2Q9NXN4 497 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 LMCD1Q9NZU5 365 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 AP4S1Q9Y587 144 aa8.88□□□□□ -0.99
TDP1-204ENST00000545686 A0A0J9YVX5 310 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 TCRBV3S1A0A5B6 114 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 ARHGEF37A1IGU5 675 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 KCNK1O00180 336 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 SDHDO14521 159 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 IRF6O14896 467 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 TRIM24O15164 1050 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 USP12O75317 370 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 VTNP04004 478 aa8.87□□□□□ -0.99
TDP1-204ENST00000545686 LGALS2P05162 132 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms