RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 PRDM6Q9NQX0 595 aa16.25■□□□□ 0.19
XRCC1-202ENST00000543982 DONSONQ9NYP3 566 aa16.25■□□□□ 0.19
XRCC1-202ENST00000543982 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
XRCC1-202ENST00000543982 NUMBLQ9Y6R0 609 aa16.25■□□□□ 0.19
XRCC1-202ENST00000543982 C2CD4DB7Z1M9 353 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-202ENST00000543982 OPHN1O60890 802 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 CISD3P0C7P0 127 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 RGRP47804 291 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 OXCT1P55809 520 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 CAV1Q03135 178 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 NIPAL4Q0D2K0 466 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 SPARCL1Q14515 664 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 KCNJ11Q14654 390 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ARHGEF18Q6ZSZ5 1173 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 TMC3Q7Z5M5 1100 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ELSPBP1Q96BH3 223 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 OXNAD1Q96HP4 312 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ECT2Q9H8V3 914 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 NT5MQ9NPB1 228 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 VPS28Q9UK41 221 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 FBXO10Q9UK96 956 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 NUP210Q8TEM1 1887 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-202ENST00000543982 TYW5A2RUC4 315 aaKnown RBP16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ANHXE9PGG2 379 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 BANF1O75531 89 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ADH5P11766 374 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 GPS2Q13227 327 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 HTR4Q13639 388 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 HNRNPDQ14103 355 aaKnown RBP16.24■□□□□ 0.19
XRCC1-202ENST00000543982 PLEKHG6Q3KR16 790 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ALS2CLQ60I27 953 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 RNF135Q8IUD6 432 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ZBTB9Q96C00 473 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 KIAA1522Q9P206 1035 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-202ENST00000543982 TTLL3Q9Y4R7 772 aa16.24■□□□□ 0.19
XRCC1-202ENST00000543982 ARNTLO00327 626 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 SMAD6O43541 496 aaKnown RBP16.23■□□□□ 0.19
XRCC1-202ENST00000543982 CACNG3O60359 315 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 AVILO75366 819 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 MT-CYBP00156 380 aaPredicted RBP16.23■□□□□ 0.19
XRCC1-202ENST00000543982 BMP1P13497 986 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 GDI1P31150 447 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 DHX9Q08211 1270 aaKnown RBP16.23■□□□□ 0.19
XRCC1-202ENST00000543982 LBRQ14739 615 aaKnown RBP16.23■□□□□ 0.19
XRCC1-202ENST00000543982 GEN1Q17RS7 908 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 PARP6Q2NL67 630 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 MSS51Q4VC12 460 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 PITRM1Q5JRX3 1037 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 FNBP1LQ5T0N5 605 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 MARC1Q5VT66 337 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 TIGD7Q6NT04 549 aaPredicted RBP16.23■□□□□ 0.19
XRCC1-202ENST00000543982 ZNF783Q6ZMS7 281 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 ADIPOR2Q86V24 386 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 ETFBKMTQ8IXQ9 262 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 KRT222Q8N1A0 295 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.198e-6■■■□□ 14.7
XRCC1-202ENST00000543982 SORCS1Q8WY21 1168 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 FATE1Q969F0 183 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 NECTIN4Q96NY8 510 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 GLOD4Q9HC38 313 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 PIH1D1Q9NWS0 290 aaKnown RBP16.23■□□□□ 0.19
XRCC1-202ENST00000543982 IGSF9Q9P2J2 1179 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 ATP8A1Q9Y2Q0 1164 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 COL6A3P12111 3177 aa16.23■□□□□ 0.19
XRCC1-202ENST00000543982 CHD5Q8TDI0 1954 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 HOXC11O43248 304 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 MTSS1O43312 755 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 PPFIA2O75334 1257 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 APRTP07741 180 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 MMP2P08253 660 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 PSMC3P17980 439 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 STK19P49842 368 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 DSC2Q02487 901 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 TFF2Q03403 129 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 SMAD4Q13485 552 aaKnown RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 SEMA5AQ13591 1074 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 ZNF534Q76KX8 674 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 PRPF39Q86UA1 669 aaKnown RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 PPIL6Q8IXY8 311 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 IQCKQ8N0W5 287 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 PDCD7Q8N8D1 485 aaKnown RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 KIAA1958Q8N8K9 716 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 RPL10LQ96L21 214 aaKnown RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 WDR83Q9BRX9 315 aaKnown RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 TXLNGYQ9BZA5 131 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 GBA3Q9H227 469 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 RSPH14Q9UHP6 348 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 TRHDEQ9UKU6 1024 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 SHROOM3Q8TF72 1996 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 GOLGA6BA6NDN3 693 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 ECI2O75521 394 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 MAGEA6P43360 314 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 MMP13P45452 471 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 RENBPP51606 427 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 PLK1P53350 603 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 HP1BP3Q5SSJ5 553 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-202ENST00000543982 TMCO4Q5TGY1 634 aa16.22■□□□□ 0.19
XRCC1-202ENST00000543982 GPR153Q6NV75 609 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms