RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 KCNK1O00180 336 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 CD160O95971 181 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 PEX11BO96011 259 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 SRCP12931 536 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 STK19P49842 368 aaPredicted RBP23.52■■□□□ 1.36
HOMER3-205ENST00000542541 SEC13P55735 322 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 IFI35P80217 286 aaPredicted RBP23.52■■□□□ 1.36
HOMER3-205ENST00000542541 ZNF234Q14588 700 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 HSF5Q4G112 596 aaPredicted RBP23.52■■□□□ 1.36
HOMER3-205ENST00000542541 EMC10Q5UCC4 262 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 SDE2Q6IQ49 451 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 SERPINA13PQ6UXR4 307 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 B4GALNT4Q76KP1 1039 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 CHPFQ8IZ52 775 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 ATL2Q8NHH9 583 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 ISG20Q96AZ6 181 aaKnown RBP23.52■■□□□ 1.36
HOMER3-205ENST00000542541 OSBPL6Q9BZF3 934 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 CEP44Q9C0F1 390 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 SEPT10Q9P0V9 454 aa23.52■■□□□ 1.36
HOMER3-205ENST00000542541 KCNN4O15554 427 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 ATP9BO43861 1147 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 CHRNB1P11230 501 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 TIE1P35590 1138 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 MMP13P45452 471 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 FNTAP49354 379 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 SLC10A7Q0GE19 358 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 ZNF235Q14590 738 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 EGFLAMQ63HQ2 1017 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 ZNF572Q7Z3I7 529 aaPredicted RBP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 SPATA4Q8NEY3 305 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 RUNDC3BQ96NL0 473 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 TMEM121Q9BTD3 319 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 CINPQ9BW66 212 aaPredicted RBP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 MFSD1Q9H3U5 465 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 USP29Q9HBJ7 922 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 RBM22Q9NW64 420 aaKnown RBP eCLIP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 TMCC1O94876 653 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 JCHAINP01591 159 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 VAV1P15498 845 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 TARSP26639 723 aaKnown RBP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 COILP38432 576 aaPredicted RBP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 HSPA9P38646 679 aaKnown RBP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 DLG2Q15700 870 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 C2orf27AQ580R0 203 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 CCDC137Q6PK04 289 aaKnown RBP23.51■■□□□ 1.35
HOMER3-205ENST00000542541 TRIM67Q6ZTA4 783 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 CCDC105Q8IYK2 499 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 ZNF687Q8N1G0 1237 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 TEX26Q8N6G2 289 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 USP33Q8TEY7 942 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 PSKH2Q96QS6 385 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 IL12RB2Q99665 862 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 C10orf88Q9H8K7 445 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 LMAN1LQ9HAT1 526 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 SUN2Q9UH99 717 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 ACTL7AQ9Y615 435 aa23.51■■□□□ 1.35
HOMER3-205ENST00000542541 MIA3Q5JRA6 1907 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 K7ERQ8 282 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 SGK1O00141 431 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 CYTH1Q15438 398 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 TEX44Q53QW1 395 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 GSTA5Q7RTV2 222 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 PCDH20Q8N6Y1 951 aaKnown RBP23.5■■□□□ 1.35
HOMER3-205ENST00000542541 FAM71DQ8N9W8 422 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 GRK7Q8WTQ7 553 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 MYO19Q96H55 970 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 CCDC114Q96M63 670 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 TRHDEQ9UKU6 1024 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 HCN2Q9UL51 889 aa23.5■■□□□ 1.35
HOMER3-205ENST00000542541 FCF1Q9Y324 198 aaKnown RBP23.5■■□□□ 1.35
HOMER3-205ENST00000542541 RNF103O00237 685 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 SMAD6O43541 496 aaKnown RBP23.49■■□□□ 1.35
HOMER3-205ENST00000542541 RNF40O75150 1001 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 NTSR1P30989 418 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 ACTN2P35609 894 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 RHOAP61586 193 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 CEP112Q8N8E3 955 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 FOXQ1Q9C009 403 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 TMEM245Q9H330 911 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 STON1Q9Y6Q2 735 aa23.49■■□□□ 1.35
HOMER3-205ENST00000542541 PTPN3P26045 913 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 RECQLP46063 649 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 KCNJ1P48048 391 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 NSUN2Q08J23 767 aaKnown RBP eCLIP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 WASHC5Q12768 1159 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 ENPP2Q13822 863 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 C22orf39Q6P5X5 142 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 PLPP6Q8IY26 295 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 CCDC89Q8N998 374 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 DDX47Q9H0S4 455 aaKnown RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 RBM12Q9NTZ6 932 aaKnown RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 CACNA2D2Q9NY47 1150 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 SIT1Q9Y3P8 196 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 MTF2Q9Y483 593 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 NYNRINQ9P2P1 1898 aaKnown RBP23.48■■□□□ 1.35
HOMER3-205ENST00000542541 EDDM13A0A1B0GTR0 161 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 C5orf60A6NFR6 353 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 TTC34A8MYJ7 566 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 ATG13O75143 517 aa23.48■■□□□ 1.35
HOMER3-205ENST00000542541 IL12RB1P42701 662 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms