RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 KLK14Q9P0G3 267 aa8.14□□□□□ -1.11
PDLIM5-221ENST00000542407 WHRNQ9P202 907 aa8.14□□□□□ -1.11
PDLIM5-221ENST00000542407 CDY2AQ9Y6F7 541 aa8.14□□□□□ -1.11
PDLIM5-221ENST00000542407 ARHGAP42A6NI28 874 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 C3orf70A6NLC5 250 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 A8MX80 341 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 A8MXQ7 604 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RTCAO00442 366 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 HCRTO43612 131 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GABBR2O75899 941 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 CST5P28325 142 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 CRABP2P29373 138 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GNL1P36915 607 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 AQP4P55087 323 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 NR1H3Q13133 447 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SEPT6Q14141 434 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 STAT4Q14765 748 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PDK3Q15120 406 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SFT2D3Q587I9 215 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC44A2Q8IWA5 706 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 C12orf29Q8N999 325 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 FNIP1Q8TF40 1166 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 HEXIM2Q96MH2 286 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TTC25Q96NG3 672 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PPP1R10Q96QC0 940 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PANX3Q96QZ0 392 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 APOL6Q9BWW8 343 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TMEM120AQ9BXJ8 343 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DCLK3Q9C098 648 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RNF186Q9NXI6 227 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GDAP2Q9NXN4 497 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 LGALS13Q9UHV8 139 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TSPAN16Q9UKR8 245 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 VANGL2Q9ULK5 521 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DNAJC16Q9Y2G8 782 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 NEU2Q9Y3R4 380 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TRPV2Q9Y5S1 764 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 VILLO15195 856 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 CRYZL1O95825 349 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 CLPTM1O96005 669 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ZBED1O96006 694 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RALAP11233 206 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 VCLP18206 1134 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 IFNA8P32881 189 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PTPN7P35236 360 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 KRT20P35900 424 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RXRGP48443 463 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RELAQ04206 551 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ASPHQ12797 758 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PIGHQ14442 188 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TAF12Q16514 161 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TRNP1Q6NT89 227 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 KLHL35Q6PF15 583 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DBX2Q6ZNG2 339 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 BBOF1Q8ND07 529 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GSTCDQ8NEC7 633 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 UBA3Q8TBC4 463 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PIP4K2CQ8TBX8 421 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DENND1AQ8TEH3 1009 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GAB3Q8WWW8 586 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 MTBPQ96DY7 904 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 PIWIL1Q96J94 861 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SLITRK1Q96PX8 696 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 HAUS8Q9BT25 410 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 OSBPL8Q9BZF1 889 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DPEP3Q9H4B8 488 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GOLGA2P5Q9HBQ8 144 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SAYSD1Q9NPB0 183 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 MEIS3P2A8K0S8 358 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 H3BUI4 141 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 FCHO1O14526 889 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ABCB1P08183 1280 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RARBP10826 455 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ZNF3P17036 446 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RPL9P32969 192 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 MAP3K7CLP57077 242 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 FOXK1P85037 733 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GOLGA7BQ2TAP0 167 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 GRAMD1BQ3KR37 738 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 MAP3K21Q5TCX8 1036 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 SLC26A7Q8TE54 656 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 ATL1Q8WXF7 558 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 RBM15Q96T37 977 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 TRIM8Q9BZR9 551 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 USP29Q9HBJ7 922 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 WASH6PQ9NQA3 447 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 KLHL11Q9NVR0 708 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DPP7Q9UHL4 492 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 DOLKQ9UPQ8 538 aa8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 HEMK1Q9Y5R4 338 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-221ENST00000542407 MRPL42Q9Y6G3 142 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms