RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 UBAP2Q5T6F2 1119 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SLC9C2Q5TAH2 1124 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ZBTB37Q5TC79 503 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 KLHDC7AQ5VTJ3 777 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 HMBOX1Q6NT76 420 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MZT2BQ6NZ67 158 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 RFWD3Q6PCD5 774 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 NSMFQ6X4W1 530 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 LDHAL6AQ6ZMR3 332 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GADL1Q6ZQY3 521 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CYFIP1Q7L576 1253 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ANKS1BQ7Z6G8 1248 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 METTL16Q86W50 562 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 C2CD5Q86YS7 1000 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 NUDCD3Q8IVD9 361 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CDKL3Q8IVW4 592 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 KLHL7Q8IXQ5 586 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ZCCHC7Q8N3Z6 543 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SLC15A4Q8N697 577 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MB21D1Q8N884 522 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 NAT8LQ8N9F0 302 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 C11orf65Q8NCR3 313 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 OR7G3Q8NG95 312 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GOT1L1Q8NHS2 421 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 RNASE11Q8TAA1 199 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SLC30A5Q8TAD4 765 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ZNF461Q8TAF7 563 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 PHOSPHO2Q8TCD6 241 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 RHPN1Q8TCX5 695 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 C10orf82Q8WW14 230 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 FIG4Q92562 907 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SYN2Q92777 582 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TANKQ92844 425 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GLG1Q92896 1179 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TNFRSF25Q93038 417 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 PTP4A1Q93096 173 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TCEAL3Q969E4 200 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 RFKQ969G6 155 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 LRRC39Q96DD0 335 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CMTM5Q96DZ9 223 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TRMT2BQ96GJ1 504 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MFSD14AQ96MC6 490 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 HEXIM2Q96MH2 286 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SLC4A9Q96Q91 983 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CITED4Q96RK1 184 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 NELL2Q99435 816 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CHP1Q99653 195 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MIPEPQ99797 713 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TCEAL7Q9BRU2 100 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TRIM62Q9BVG3 475 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GTPBP2Q9BX10 602 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GCOM2Q9BZD3 368 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GPR61Q9BZJ8 451 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 PIGUQ9H490 435 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 GAREM1Q9H706 876 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 RPF2Q9H7B2 306 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SMYD3Q9H7B4 428 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CXorf21Q9HAI6 301 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ARNT2Q9HBZ2 717 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 POLD4Q9HCU8 107 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 TM9SF3Q9HD45 589 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 PNPLA8Q9NP80 782 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MRPS30Q9NP92 439 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 CNNM1Q9NRU3 951 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SEMA3GQ9NS98 782 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ENPP5Q9UJA9 477 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 DNMT3LQ9UJW3 386 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ZNF229Q9UJW7 825 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 PSME2Q9UL46 239 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MRPS7Q9Y2R9 242 aaKnown RBP5.27□□□□□ -1.57
SNHG1-218ENST00000541615 AUP1Q9Y679 476 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 AP4B1Q9Y6B7 739 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SNCAIPQ9Y6H5 919 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 WASF2Q9Y6W5 498 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 SHPRHQ149N8 1683 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 MYH13Q9UKX3 1938 aa5.27□□□□□ -1.57
SNHG1-218ENST00000541615 STK36Q9NRP7 1315 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 A0A1B0GVM2 712 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 TTC26A0AVF1 554 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 PIPSLA2A3N6 862 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 A6NCN8 305 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 FAM170BA6NMN3 283 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 PDZK1P1A8MUH7 402 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 KCNJ18B7U540 433 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 USP17L13C9JLJ4 530 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 KLRF2D3W0D1 207 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 USP17L17D6RBQ6 530 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 E9PAM4 449 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 LOC110117498-PIK3R3F6TDL0 507 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 RBAK-RBAKDNI3L0D1 243 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 TRIM38O00635 465 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 ABCD4O14678 606 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 AIM2O14862 343 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 TM9SF1O15321 606 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 DYNC1LI2O43237 492 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-218ENST00000541615 HS6ST1O60243 411 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 CST8O60676 142 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 TRIM3O75382 744 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms