RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 NYNRINQ9P2P1 1898 aaKnown RBP28.32■■■□□ 2.12
CCM2-218ENST00000541586 TYW5A2RUC4 315 aaKnown RBP28.32■■■□□ 2.12
CCM2-218ENST00000541586 RASA4BC9J798 803 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 RASA4O43374 803 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 TYRP14679 529 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 PFKPQ01813 784 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 TEX44Q53QW1 395 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 IER5LQ5T953 404 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 VAT1Q99536 393 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 RETREG1Q9H6L5 497 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 SAYSD1Q9NPB0 183 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 TRHDEQ9UKU6 1024 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 F5H423 210 aaPredicted RBP28.31■■■□□ 2.12
CCM2-218ENST00000541586 RIPK2O43353 540 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 RAMP2O60895 175 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 JCHAINP01591 159 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 CDH4P55283 916 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 ARL4CP56559 192 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 PARP6Q2NL67 630 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 FNBP1LQ5T0N5 605 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 FYB2Q5VWT5 728 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 CENPUQ71F23 418 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 IPO11Q9UI26 975 aaKnown RBP28.31■■■□□ 2.12
CCM2-218ENST00000541586 NFS1Q9Y697 457 aa28.31■■■□□ 2.12
CCM2-218ENST00000541586 ARHGAP42A6NI28 874 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 MATN3O15232 486 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 ZBTB24O43167 697 aaPredicted RBP28.3■■■□□ 2.12
CCM2-218ENST00000541586 CCNB1P14635 433 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 PSMB4P28070 264 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 GJA4P35212 333 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 MAGEA4P43358 317 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 TIGD7Q6NT04 549 aaPredicted RBP28.3■■■□□ 2.12
CCM2-218ENST00000541586 AGAP3Q96P47 875 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 RUFY1Q96T51 708 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 PHACTR1Q9C0D0 580 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 SLC2A4RGQ9NR83 387 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 MUC3AQ02505 3323 aa28.3■■■□□ 2.12
CCM2-218ENST00000541586 E7EVH7 732 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 GFRA2O00451 464 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 TPSB2P20231 275 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 IFI35P80217 286 aaPredicted RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 GPS2Q13227 327 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 SLC29A2Q14542 456 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 POLD3Q15054 466 aaPredicted RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 TPSAB1Q15661 275 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 PARP15Q460N3 678 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 SLC44A4Q53GD3 710 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 DENND2CQ68D51 928 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 LRIG3Q6UXM1 1119 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 HJURPQ8NCD3 748 aaPredicted RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 OR2W6PQ8NHA6 318 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 DNASE1L2Q92874 299 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 TEKT5Q96M29 485 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 NINJ2Q9NZG7 142 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 CA14Q9ULX7 337 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 TRIOO75962 3097 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 TTC4O95801 387 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 CD68P34810 354 aaPredicted RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 YBEYP58557 167 aaPredicted RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 PDIA2Q13087 525 aaKnown RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 FASTKD3Q14CZ7 662 aaKnown RBP28.29■■■□□ 2.12
CCM2-218ENST00000541586 KYNUQ16719 465 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 MSS51Q4VC12 460 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 PPP1R21Q6ZMI0 780 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 PDIK1LQ8N165 341 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 CARNMT1Q8N4J0 409 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 C9orf72Q96LT7 481 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 TRPV5Q9NQA5 729 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 FBXL21Q9UKT6 434 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 CLEC4EQ9ULY5 219 aa28.29■■■□□ 2.12
CCM2-218ENST00000541586 CLDN11O75508 207 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 BANF1O75531 89 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 NUDT17P0C025 328 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 HOXD9P28356 352 aaPredicted RBP28.28■■■□□ 2.12
CCM2-218ENST00000541586 MCUQ8NE86 351 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 USP33Q8TEY7 942 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 SERPINB12Q96P63 405 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 IL12RB2Q99665 862 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 GBA3Q9H227 469 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 OGFRQ9NZT2 677 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 PIAS3Q9Y6X2 628 aa28.28■■■□□ 2.12
CCM2-218ENST00000541586 MYO18AQ92614 2054 aaKnown RBP28.28■■■□□ 2.12
CCM2-218ENST00000541586 E7ESA3 106 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 H3BQF6 201 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 ALOX15BO15296 676 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 ACSL3O95573 720 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 SLC6A11P48066 632 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 MTM1Q13496 603 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 HP1BP3Q5SSJ5 553 aaPredicted RBP28.27■■■□□ 2.12
CCM2-218ENST00000541586 NAIF1Q69YI7 327 aaPredicted RBP28.27■■■□□ 2.12
CCM2-218ENST00000541586 ITPRIPL1Q6GPH6 555 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 CHST9Q7L1S5 443 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 TICRRQ7Z2Z1 1910 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 C12orf40Q86WS4 652 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 ZBED8Q8IZ13 594 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 CNTD1Q8N815 330 aa28.27■■■□□ 2.12
CCM2-218ENST00000541586 ZNF419Q96HQ0 510 aaPredicted RBP28.27■■■□□ 2.12
CCM2-218ENST00000541586 XPO6Q96QU8 1125 aaKnown RBP28.27■■■□□ 2.12
CCM2-218ENST00000541586 FRMD8Q9BZ67 464 aaPredicted RBP28.27■■■□□ 2.12
CCM2-218ENST00000541586 MARK1Q9P0L2 795 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms