RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 GRM3Q14832 879 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 NCBP2-AS2Q69YL0 99 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 TSSK4Q6SA08 328 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 LINGO4Q6UY18 593 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 SPOCD1Q6ZMY3 1216 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 CCDC50Q8IVM0 306 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 RNF25Q96BH1 459 aaPredicted RBP19.13■□□□□ 0.65
VPS33A-205ENST00000541169 HES6Q96HZ4 224 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 CELF6Q96J87 481 aaKnown RBP19.13■□□□□ 0.65
VPS33A-205ENST00000541169 TSGA13Q96PP4 275 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 GOLPH3Q9H4A6 298 aa19.13■□□□□ 0.65
VPS33A-205ENST00000541169 NUP205Q92621 2012 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 C1QTNF3-AMACRE9PGA6 284 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 H0Y858 1186 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 SIN3BO75182 1162 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 MT-CO1P00395 513 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 IGLV3-19P01714 112 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 DNTTP04053 509 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 PRNPP04156 253 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 NDUFV2P19404 249 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 TGM2P21980 687 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 GLDCP23378 1020 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 PEX5P50542 639 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 COPAP53621 1224 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 PDK1Q15118 436 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 SPDYCQ5MJ68 293 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 SLC36A4Q6YBV0 504 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 USP30Q70CQ3 517 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 KBTBD6Q86V97 674 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 RFX6Q8HWS3 928 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 PQLC3Q8N755 202 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 TMIEQ8NEW7 156 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 GAB3Q8WWW8 586 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 ATOH1Q92858 354 aaPredicted RBP19.12■□□□□ 0.65
VPS33A-205ENST00000541169 KCNF1Q9H3M0 494 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 PDFQ9HBH1 243 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 ITM2CQ9NQX7 267 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 AMACRQ9UHK6 382 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 CAPN6Q9Y6Q1 641 aa19.12■□□□□ 0.65
VPS33A-205ENST00000541169 PPP1R12AO14974 1030 aaPredicted RBP19.11■□□□□ 0.65
VPS33A-205ENST00000541169 TJP3O95049 919 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 POP4O95707 220 aaKnown RBP19.11■□□□□ 0.65
VPS33A-205ENST00000541169 CD160O95971 181 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 C5AR1P21730 350 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 CCNCP24863 283 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 GARSP41250 739 aaKnown RBP19.11■□□□□ 0.65
VPS33A-205ENST00000541169 MAPK8P45983 427 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 FNTBP49356 437 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 NSUN2Q08J23 767 aaKnown RBP eCLIP19.11■□□□□ 0.65
VPS33A-205ENST00000541169 CARD16Q5EG05 197 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 MFSD7Q6UXD7 560 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 OR2AP1Q8NGE2 309 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 OR2A12Q8NGT7 310 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 KRT35Q92764 455 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 HDAC11Q96DB2 347 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 GDAP1L1Q96MZ0 367 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 MKRN2Q9H000 416 aaKnown RBP19.11■□□□□ 0.65
VPS33A-205ENST00000541169 ETNK2Q9NVF9 386 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 USP36Q9P275 1121 aaKnown RBP19.11■□□□□ 0.65
VPS33A-205ENST00000541169 SEPT3Q9UH03 358 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 NCKAP1Q9Y2A7 1128 aa19.11■□□□□ 0.65
VPS33A-205ENST00000541169 hCG_1818297A0A087WSY0 165 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 MTSS1O43312 755 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 MAFKO60675 156 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 RPP40O75818 363 aaKnown RBP19.1■□□□□ 0.65
VPS33A-205ENST00000541169 TMCC1O94876 653 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 IGSF6O95976 241 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 NBL1P41271 181 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 CSNK1DP48730 415 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 RHOAP61586 193 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 HNRNPDQ14103 355 aaKnown RBP19.1■□□□□ 0.65
VPS33A-205ENST00000541169 CST6Q15828 149 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 RALGPS1Q5JS13 557 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 HEATR6Q6AI08 1181 aaKnown RBP19.1■□□□□ 0.65
VPS33A-205ENST00000541169 KIAA1324Q6UXG2 1013 aaKnown RBP19.1■□□□□ 0.65
VPS33A-205ENST00000541169 Q6ZVU0 165 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 PLD5Q8N7P1 536 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 ZNF366Q8N895 744 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 P3H4Q92791 437 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 PPP1R16AQ96I34 528 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 FAM129BQ96TA1 746 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 OSBPL1AQ9BXW6 950 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 PCED1AQ9H1Q7 454 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 PPM1HQ9ULR3 514 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 FZD4Q9ULV1 537 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 TPX2Q9ULW0 747 aaKnown RBP19.1■□□□□ 0.65
VPS33A-205ENST00000541169 MFHAS1Q9Y4C4 1052 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 FANCMQ8IYD8 2048 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 PLXND1Q9Y4D7 1925 aa19.1■□□□□ 0.65
VPS33A-205ENST00000541169 A0A0U1RQJ8 604 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 J3KR12 359 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 K7ERQ8 282 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 SMAD6O43541 496 aaKnown RBP19.09■□□□□ 0.65
VPS33A-205ENST00000541169 MFSD11O43934 449 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 CST8O60676 142 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 FTCDO95954 541 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 CES1P23141 567 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 CHRNA3P32297 505 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 P2RY2P41231 377 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 RPS14P62263 151 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms