RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PGAM1P18669 254 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 HDCP19113 662 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 PPP3CCP48454 512 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 IFNAR2P48551 515 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 CDH4P55283 916 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 GNA12Q03113 381 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 IL10RBQ08334 325 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 HNRNPDQ14103 355 aaKnown RBP12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 PARP15Q460N3 678 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 FSCBQ5H9T9 825 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 CXorf57Q6NSI4 855 aaKnown RBP12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 TAOK1Q7L7X3 1001 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 DNAAF3Q8N9W5 541 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 SHKBP1Q8TBC3 707 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 ARRDC2Q8TBH0 407 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 ZNF669Q96BR6 464 aaPredicted RBP12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 MFSD3Q96ES6 412 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC46A2Q9BY10 475 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 STOML2Q9UJZ1 356 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 GRID1Q9ULK0 1009 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 SSX2IPQ9Y2D8 614 aa12.48□□□□□ -0.41
AP003559.1-201ENST00000540906 ZCWPW2A0A1B0GU75 182 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 ERI2A8K979 691 aaKnown RBP12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 PER2O15055 1255 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 CA3P07451 260 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 GSTA2P09210 222 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 ERVK-10P10266 1014 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 NMBRP28336 390 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 ATP5DP30049 168 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 CD86P42081 329 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 RGRP47804 291 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 WNT3AP56704 352 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 NTHL1P78549 312 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 DMTNQ08495 405 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 PCSK7Q16549 785 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 MARC1Q5VT66 337 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 SH2D5Q6ZV89 423 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 LRRC49Q8IUZ0 686 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 DENND1AQ8TEH3 1009 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 BHMTQ93088 406 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 FATE1Q969F0 183 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 IMP4Q96G21 291 aaKnown RBP12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 EMILIN2Q9BXX0 1053 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC25A51Q9H1U9 297 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 MAN1C1Q9NR34 630 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 INTS9Q9NV88 658 aaKnown RBP12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 CLEC4EQ9ULY5 219 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 ASB3Q9Y575 518 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 RPS6KL1Q9Y6S9 549 aa12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 HELZP42694 1942 aaKnown RBP12.47□□□□□ -0.41
AP003559.1-201ENST00000540906 TYROBPO43914 113 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 TBL1XO60907 577 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 CLASP2O75122 1294 aaKnown RBP12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 PBX2P40425 430 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 YBEYP58557 167 aaPredicted RBP12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 TNK2Q07912 1038 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 ITKQ08881 620 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 PRPSAP1Q14558 356 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 LBRQ14739 615 aaKnown RBP12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC1A5Q15758 541 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 QPCTQ16769 361 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 ANO4Q32M45 955 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 ANKRD20A4Q4UJ75 823 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 RABGAP1LQ5R372 815 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 CCDC149Q6ZUS6 474 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 LRRC6Q86X45 466 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 GDAP1Q8TB36 358 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 CENPTQ96BT3 561 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 SPON2Q9BUD6 331 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 EPN3Q9H201 632 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 CERS4Q9HA82 394 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 PPCSQ9HAB8 311 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 CFAP97Q9P2B7 532 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 DNMT3BQ9UBC3 853 aaKnown RBP12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 STK39Q9UEW8 545 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 CCL26Q9Y258 94 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 ACTL7BQ9Y614 415 aa12.46□□□□□ -0.41
AP003559.1-201ENST00000540906 TRIM49D1C9J1S8 452 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 SNAP91O60641 907 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 RHOCP08134 193 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 INHBAP08476 426 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 KRT4P19013 534 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 RENBPP51606 427 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 GEMP55040 296 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 CDH17Q12864 832 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 MSLNQ13421 630 aaPredicted RBP12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 POU6F1Q14863 301 aa12.46□□□□□ -0.42
AP003559.1-201ENST00000540906 SHHQ15465 462 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms