RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ETFBP38117 255 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 GRIA1P42261 906 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 GEMP55040 296 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 MAGOHP61326 146 aaKnown RBP17.19■□□□□ 0.34
COPS3-212ENST00000539941 MARC1Q5VT66 337 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 NAPEPLDQ6IQ20 393 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 ZNF783Q6ZMS7 281 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 HTR3DQ70Z44 454 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 SPRED2Q7Z698 418 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 LINC00523Q86TU6 105 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 CFAP52Q8N1V2 620 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 TEX26Q8N6G2 289 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 USP33Q8TEY7 942 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 ARHGEF2Q92974 986 aaKnown RBP17.19■□□□□ 0.34
COPS3-212ENST00000539941 WBP2Q969T9 261 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 CYTH2Q99418 400 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 CASS4Q9NQ75 786 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 BATF3Q9NR55 127 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 KLC4Q9NSK0 619 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 ZMYM5Q9UJ78 669 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 A0A0C4DFX4 3053 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
COPS3-212ENST00000539941 A0A1W2PRU2 124 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 TYW5A2RUC4 315 aaKnown RBP17.18■□□□□ 0.34
COPS3-212ENST00000539941 GFRA2O00451 464 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 PRAMEF11O60813 436 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 HLA-DQB2P05538 268 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 GEMIN4P57678 1058 aaKnown RBP17.18■□□□□ 0.34
COPS3-212ENST00000539941 RPS24P62847 133 aaKnown RBP17.18■□□□□ 0.34
COPS3-212ENST00000539941 GNA12Q03113 381 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 NR1H3Q13133 447 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
COPS3-212ENST00000539941 MTM1Q13496 603 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 CAPN12Q6ZSI9 719 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 TAOK1Q7L7X3 1001 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 HJURPQ8NCD3 748 aaPredicted RBP17.18■□□□□ 0.34
COPS3-212ENST00000539941 FBF1Q8TES7 1133 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 STAMBPL1Q96FJ0 436 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 SLC25A51Q9H1U9 297 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 HAUS2Q9NVX0 235 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 ZDHHC7Q9NXF8 308 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 TBC1D30Q9Y2I9 924 aa17.18■□□□□ 0.34
COPS3-212ENST00000539941 TCRBV9S1A1TA0A576 114 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 J3KR12 359 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 NDUFAB1O14561 156 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 CSPG5O95196 566 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 PPP2R2AP63151 447 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 ARHGAP15Q53QZ3 475 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 ZNF697Q5TEC3 545 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 TMCO4Q5TGY1 634 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 STEAP4Q687X5 459 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 CYS1Q717R9 158 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 OTOP3Q7RTS5 596 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 ZNF354CQ86Y25 554 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 CPXM2Q8N436 756 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 CFAP36Q96G28 342 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 OXNAD1Q96HP4 312 aaPredicted RBP17.17■□□□□ 0.34
COPS3-212ENST00000539941 ZNF419Q96HQ0 510 aaPredicted RBP17.17■□□□□ 0.34
COPS3-212ENST00000539941 XPO6Q96QU8 1125 aaKnown RBP17.17■□□□□ 0.34
COPS3-212ENST00000539941 LMAN2LQ9H0V9 348 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 ARHGAP26Q9UNA1 814 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 SH3BP1Q9Y3L3 701 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 MAD1L1Q9Y6D9 718 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 CDH23Q9H251 3354 aa17.17■□□□□ 0.34
COPS3-212ENST00000539941 RHOCP08134 193 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 EPCAMP16422 314 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 PGAM1P18669 254 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 GCAP28676 217 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 NPY2RP49146 381 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 ACTN3Q08043 901 aaPredicted RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 MPP3Q13368 585 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 SHKBP1Q8TBC3 707 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 DHRS4Q9BTZ2 278 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 CNOT10Q9H9A5 744 aaKnown RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 PDFQ9HBH1 243 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 VPS45Q9NRW7 570 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 BFARQ9NZS9 450 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 PSMC3IPQ9P2W1 217 aaPredicted RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 HELZP42694 1942 aaKnown RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 POC1B-GALNT4F8VUJ3 575 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 RFPL2O75678 378 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 PRKCHP24723 683 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 ACVRL1P37023 503 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 ZXDBP98169 803 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 CDH17Q12864 832 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 LBRQ14739 615 aaKnown RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 SNCBQ16143 134 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 ARMC3Q5W041 872 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 UNC5AQ6ZN44 842 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 MPP5Q8N3R9 675 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 OR52K1Q8NGK4 314 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 CDX2Q99626 313 aaPredicted RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 SLC46A2Q9BY10 475 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 TASP1Q9H6P5 420 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 CFAP97Q9P2B7 532 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms