RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 UBQLN1Q9UMX0 589 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 PCDHGB4Q9UN71 923 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 G3BP2Q9UN86 482 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 PCDHGB5Q9Y5G0 923 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 BRCA1P38398 1863 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SYNJ2BP-COX16A0A087WUM0 186 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 TCAF2A6NFQ2 919 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 UNCXA6NJT0 531 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ASB14A6NK59 587 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 FAM72CH0Y354 149 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 TK2O00142 265 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 AP3B1O00203 1094 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 TMCC1O94876 653 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CD4P01730 458 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ENO3P13929 434 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 DNAJB2P25686 324 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 MSX2P35548 267 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 DPP6P42658 865 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 POLD2P49005 469 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SLC12A1Q13621 1099 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 FAM72AQ5TYM5 149 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SYPL2Q5VXT5 272 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ITPRIPL1Q6GPH6 555 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 FAM72DQ6L9T8 149 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ZC3HC1Q86WB0 502 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 FAM72BQ86X60 149 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ZFP28Q8NHY6 868 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 KCTD13Q8WZ19 329 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 USP13Q92995 863 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 NTAN1Q96AB6 310 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CNBD2Q96M20 576 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 C16orf70Q9BSU1 422 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 PIGVQ9NUD9 493 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 UTP6Q9NYH9 597 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 COX16Q9P0S2 106 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 GJD2Q9UKL4 321 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 DMTF1Q9Y222 760 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SBF1O95248 1867 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 FNDC1Q4ZHG4 1894 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 TRIM38O00635 465 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 SPTLC1O15269 473 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 PSMD3O43242 534 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 DLX3O60479 287 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 SLC35E2BP0CK96 405 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 HSPA1AP0DMV8 641 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 HSPA1BP0DMV9 641 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 NMBRP28336 390 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 TKTP29401 623 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 PSMD8P48556 350 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 NR1H2P55055 460 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 CDKL1Q00532 357 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 SCAPQ12770 1279 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 NME3Q13232 169 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 USP10Q14694 798 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 MYLK3Q32MK0 819 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 GLRA4Q5JXX5 417 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 MARCH8Q5T0T0 291 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 GJC2Q5T442 439 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 TMEM198Q66K66 360 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 NXNQ6DKJ4 435 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 MAMDC4Q6UXC1 1216 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 APPL2Q8NEU8 664 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 PPTC7Q8NI37 304 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 IRGQQ8WZA9 623 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 LENG1Q96BZ8 264 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 MAELQ96JY0 434 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 SCYL1Q96KG9 808 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 TNIP3Q96KP6 325 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 PPP1R36Q96LQ0 422 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 VAT1Q99536 393 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 KIFC1Q9BW19 673 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 EIF2AQ9BY44 585 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 MROH8Q9H579 483 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 LRRC4Q9HBW1 653 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 HSFX1Q9UBD0 423 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 CSADQ9Y600 493 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 COPG1Q9Y678 874 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 ARHGAP10A1A4S6 786 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 TRPC5OSA6NMA1 111 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 STX16-NPEPL1H3BU86 382 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 NPHS1O60500 1241 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 RNASEH2AO75792 299 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 ZNF26P17031 533 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 TPH1P17752 444 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 NFKB1P19838 968 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 PNPLA4P41247 253 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 TPI1P60174 286 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 C1QTNF8P60827 252 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 CDH17Q12864 832 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 GK3PQ14409 553 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 SH2D4BQ5SQS7 431 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 C6orf52Q5T4I8 152 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 LRRC8EQ6NSJ5 796 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 TAPT1Q6NXT6 567 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 IYDQ6PHW0 289 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 CENPLQ8N0S6 344 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 FSTL5Q8N475 847 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms