RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SOCS2O14508 198 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 MYF6P23409 242 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 KCNC4Q03721 635 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 MOGQ16653 247 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 GLRA4Q5JXX5 417 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 ZNF354CQ86Y25 554 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 SLC15A3Q8IY34 581 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 CPNE9Q8IYJ1 553 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 PACRGLQ8N7B6 248 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 MFSD2AQ8NA29 543 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 NIFKQ9BYG3 293 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 CCDC68Q9H2F9 335 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 SIX4Q9UIU6 781 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 GNPTGQ9UJJ9 305 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 A0A1W2PPW3 197 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 KCNU1A8MYU2 1149 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 HACD1B0YJ81 288 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 XPOTO43592 962 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 CABYRO75952 493 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 PRKCQQ04759 706 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 DCAF6Q58WW2 860 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 OGFOD2Q6N063 350 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 XKR5Q6UX68 686 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 NSUN6Q8TEA1 469 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 FCRL3Q96P31 734 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 ACSS2Q9NR19 701 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 HESX1Q9UBX0 185 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 ZNF70Q9UC06 446 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 SARDHQ9UL12 918 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 TK2O00142 265 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 ESRRBO95718 433 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 CDH3P22223 829 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 NME5P56597 212 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 STX5Q13190 355 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 ITGA7Q13683 1181 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 TMEM53Q6P2H8 277 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 GK5Q6ZS86 529 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 TCF12Q99081 682 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 TUT1Q9H6E5 874 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 SMOXQ9NWM0 555 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 HES2Q9Y543 173 aa18.87■□□□□ 0.61
SFSWAP-207ENST00000538548 PRORSD1PA6NEY8 169 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 TIMM44O43615 452 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 GNAO1P09471 354 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 NAGLUP54802 743 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 FGD3Q5JSP0 725 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 AARS2Q5JTZ9 985 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 TREML2Q5T2D2 321 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 OLFML1Q6UWY5 402 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 SPAG4Q9NPE6 437 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 RNF146Q9NTX7 359 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 TANC1Q9C0D5 1861 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 GPR107Q5VW38 600 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 NCBP2-AS2Q69YL0 99 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 CYP2R1Q6VVX0 501 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 TMEM151AQ8N4L1 468 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 MAELQ96JY0 434 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 CSPG4P5Q96PW8 444 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 AGAP2Q99490 1192 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 TASP1Q9H6P5 420 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 LRRC40Q9H9A6 602 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 CYP3A43Q9HB55 503 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 MRGBPQ9NV56 204 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 CACNA2D2Q9NY47 1150 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 GGA3Q9NZ52 723 aa18.86■□□□□ 0.61
SFSWAP-207ENST00000538548 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 SULT1C4O75897 302 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 ZNF24P17028 368 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 RXRGP48443 463 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 RALGDSQ12967 914 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 PMS2P3Q13401 168 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 ATP1A4Q13733 1029 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 LRP8Q14114 963 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 MAPRE2Q15555 327 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 LCLAT1Q6UWP7 414 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 CAMK1DQ8IU85 385 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 LSMEM2Q8N112 164 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 ZNF669Q96BR6 464 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 LGMNQ99538 433 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 APBA2Q99767 749 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 ADI1Q9BV57 179 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 TRNAU1APQ9NX07 287 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 CD300AQ9UGN4 299 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 GTF2IRD1Q9UHL9 959 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 TSPAN16Q9UKR8 245 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 TRPC5OSA6NMA1 111 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 RNF103O00237 685 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 TIPRLO75663 272 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 CYP3A5P20815 502 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 CD247P20963 164 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 BMXP51813 675 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 RAB39AQ14964 217 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 C6orf10Q5SRN2 563 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 INTS11Q5TA45 600 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 ERMP1Q7Z2K6 904 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 C1orf127Q8N9H9 656 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 CXorf38Q8TB03 319 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 DNAI2Q9GZS0 605 aa18.85■□□□□ 0.61
SFSWAP-207ENST00000538548 RMI1Q9H9A7 625 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms