RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 POM121BA6NF01 834 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 SMAD6O43541 496 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 SLC28A2O43868 658 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 PAGE1O75459 146 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 CLDN11O75508 207 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 CNTN5O94779 1100 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 ENDOD1O94919 500 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 PRNPP04156 253 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 RHOCP08134 193 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 GNA15P30679 374 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 FZD2Q14332 565 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 DEFB133Q30KQ1 61 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 TMEM259Q4ZIN3 620 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 ISM2Q6H9L7 571 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 ZCCHC8Q6NZY4 707 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 ERN2Q76MJ5 926 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 EFL1Q7Z2Z2 1120 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 C14orf80Q86SX3 495 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 TMIEQ8NEW7 156 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 IFT43Q96FT9 208 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 CEP63Q96MT8 703 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 SLC2A13Q96QE2 648 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 PSMB7Q99436 277 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 C2orf49Q9BVC5 232 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 INTS2Q9H0H0 1204 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 USP29Q9HBJ7 922 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 CNTN6Q9UQ52 1028 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 TBC1D30Q9Y2I9 924 aa14.33□□□□□ -0.12
SMARCA4-206ENST00000538456 RAD51BO15315 384 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 P4HA2O15460 535 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 SMC2O95347 1197 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 KRT83P78385 493 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 STIM1Q13586 685 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 FGL2Q14314 439 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 DRAP1Q14919 205 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 MEA1Q16626 185 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 ALFQ53S48 1182 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 ARSIQ5FYB1 569 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 KLHL10Q6JEL2 608 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 C22orf39Q6P5X5 142 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 PRICKLE2Q7Z3G6 844 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 PARGQ86W56 976 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 FMR1NBQ8N0W7 255 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 EHBP1Q8NDI1 1231 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 SNRNP27Q8WVK2 155 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 MED8Q96G25 268 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 BMFQ96LC9 184 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 SLC46A1Q96NT5 459 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 CPXM1Q96SM3 734 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 UBE2TQ9NPD8 197 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 IL36AQ9UHA7 158 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 ENTPD2Q9Y5L3 495 aa14.32□□□□□ -0.12
SMARCA4-206ENST00000538456 A0A0D9SEW6 157 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 SPTY2D1-AS1A0A0U1RR47 76 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 H3BM21 787 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 K7ENP7 123 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 CASC3O15234 703 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 HSF2BPO75031 334 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 LEFTY1O75610 366 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 ADCY5O95622 1261 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 PAK4O96013 591 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 CSF2P04141 144 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 NME1P15531 152 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 USP8P40818 1118 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 RECQLP46063 649 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 NEK3P51956 506 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 CDH4P55283 916 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 KCNC4Q03721 635 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 PDE1CQ14123 709 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 ZSCAN23Q3MJ62 389 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 EFHC1Q5JVL4 640 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 INO80CQ6PI98 192 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 KYAT3Q6YP21 454 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 RBM44Q6ZP01 1051 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 DPY19L3Q6ZPD9 716 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 FAM183BPQ6ZVS7 135 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 TFAP2DQ7Z6R9 452 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 DCP2Q8IU60 420 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 LMX1AQ8TE12 382 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 PPP1R16AQ96I34 528 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 HDAC8Q9BY41 377 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 SLC17A9Q9BYT1 436 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 SYNDIG1Q9H7V2 258 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 GPR27Q9NS67 375 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 IPO11Q9UI26 975 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 KLF15Q9UIH9 416 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 SNX10Q9Y5X0 201 aa14.31□□□□□ -0.12
SMARCA4-206ENST00000538456 M0QYT0 321 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 MUSKO15146 869 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 AQP9O43315 295 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 LZTS3O60299 673 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 GLI1P08151 1106 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 ADRB3P13945 408 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 JUNDP17535 347 aa14.3□□□□□ -0.12
SMARCA4-206ENST00000538456 RPS21P63220 83 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms