RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SNX16P57768 344 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ZBED6P86452 979 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 IRF9Q00978 393 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PFKPQ01813 784 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ITIH3Q06033 890 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 BST2Q10589 180 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TWF1Q12792 350 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ADAM15Q13444 863 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ELF2Q15723 593 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CNGA2Q16280 664 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ASIC2Q16515 512 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CCDC142Q17RM4 750 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 AAK1Q2M2I8 961 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TDRD12Q587J7 1177 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FIGNQ5HY92 759 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ATAT1Q5SQI0 421 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 RARS2Q5T160 578 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CYP4A22Q5TCH4 519 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ARHGAP17Q68EM7 881 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 VASNQ6EMK4 673 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ANKRD54Q6NXT1 300 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FAM171BQ6P995 826 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 LILRA6Q6PI73 481 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TMC5Q6UXY8 1006 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CYP26C1Q6V0L0 522 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TMEM184AQ6ZMB5 413 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SLC47A2Q86VL8 602 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 KIF18BQ86Y91 864 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CILP2Q8IUL8 1156 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CNGA4Q8IV77 575 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 VSTM4Q8IW00 320 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FUKQ8N0W3 1084 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SIX6OS1Q8N1H7 587 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 NXPE1Q8N323 547 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 UBR7Q8N806 425 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ANKRD52Q8NB46 1076 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 LEMD2Q8NC56 503 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CHST14Q8NCH0 376 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 MSANTD4Q8NCY6 345 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 VN1R2Q8NFZ6 395 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TFAP2BQ92481 460 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SMG7Q92540 1137 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PPP1R13BQ96KQ4 1090 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CEP295NLQ96MC4 621 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF512Q96ME7 567 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 RIPOR3Q96MK2 946 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SLITRK1Q96PX8 696 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 GCNAQ96QF7 691 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PKMYT1Q99640 499 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 HNRNPABQ99729 332 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 BOCQ9BWV1 1114 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 APOL5Q9BWW9 433 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 NAA15Q9BXJ9 866 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 DUSP16Q9BY84 665 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 RHOBTB2Q9BYZ6 727 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SYNCQ9H7C4 482 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 UBE2ZQ9H832 354 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 LRRC4Q9HBW1 653 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ASAH2Q9NR71 780 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SEPT11Q9NVA2 429 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TMLHEQ9NVH6 421 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 ARGLU1Q9NWB6 273 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 SPATA6Q9NWH7 488 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 UXTQ9UBK9 157 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 B4GALT6Q9UBX8 382 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CD207Q9UJ71 328 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 AJAP1Q9UKB5 411 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 TSPAN16Q9UKR8 245 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CAPN11Q9UMQ6 739 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 MAGED2Q9UNF1 606 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 COG5Q9UP83 839 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 WASF3Q9UPY6 502 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 FAM50BQ9Y247 325 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 NME7Q9Y5B8 376 aa4.51□□□□□ -1.69
SNHG1-208ENST00000538266 PRRC2BQ5JSZ5 2229 aaKnown RBP4.51□□□□□ -1.69
SNHG1-208ENST00000538266 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 PRAMEF25A6NGN4 478 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 USP27XA6NNY8 438 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 AKR1B15C9JRZ8 316 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 H3BQ06 376 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF197O14709 1029 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 XPO1O14980 1071 aaKnown RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 RTN3O95197 1032 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 SEC24AO95486 1093 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 VNN2O95498 520 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 LSM8O95777 96 aaKnown RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 SERPING1P05155 500 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 POU2F2P09086 479 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 CSH1P0DML2 217 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 CSH2P0DML3 217 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 MYL4P12829 197 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 PTPN2P17706 415 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 ATF6P18850 670 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 YWHAQP27348 245 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 MTHFRP42898 656 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 ACADSBP45954 432 aa4.5□□□□□ -1.69
SNHG1-208ENST00000538266 NSFP46459 744 aaKnown RBP4.5□□□□□ -1.69
SNHG1-208ENST00000538266 MASP1P48740 699 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms