RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 JCHAINP01591 159 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 CXCL10P02778 98 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 SNRPAP09012 282 aaKnown RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 DHRS4L1P0CG22 281 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 NFKB1P19838 968 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 CD151P48509 253 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 MLLT6P55198 1093 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 ARPP19P56211 112 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 NRG1Q02297 640 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 BMPR2Q13873 1038 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 WASHC2DQ5SRD0 308 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 PIK3R6Q5UE93 754 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 AFMIDQ63HM1 303 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 CDHR3Q6ZTQ4 885 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 KLHDC8BQ8IXV7 354 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 ZNF683Q8IZ20 524 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TEX9Q8N6V9 391 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 DNAJC9Q8WXX5 260 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 APBB2Q92870 758 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 ZNF419Q96HQ0 510 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 SERPINB11Q96P15 392 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 SLC39A8Q9C0K1 460 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 FBXO44Q9H4M3 255 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TLE6Q9H808 572 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 CASS4Q9NQ75 786 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 SLC17A6Q9P2U8 582 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 OGDHLQ9ULD0 1010 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 LRFN2Q9ULH4 789 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TTC3P53804 2025 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TBKBP1A7MCY6 615 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 E9PAM4 449 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TBX18O95935 607 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 PGAM1P18669 254 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 HTR7P34969 479 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 ERFP50548 548 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 RASSF2P50749 326 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 CCL23P55773 120 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 GPR17Q13304 367 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 KPNB1Q14974 876 aaKnown RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 ACSBG2Q5FVE4 666 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TTC7BQ86TV6 843 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TTC17Q96AE7 1141 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 APOPT1Q96IL0 206 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 SCYL1Q96KG9 808 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 FCRL3Q96P31 734 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-210ENST00000538120 VAT1Q99536 393 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TMEM175Q9BSA9 504 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 SAGE1Q9NXZ1 904 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 HEY2Q9UBP5 337 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 TLR6Q9Y2C9 796 aa10.94□□□□□ -0.66
CLIP1-210ENST00000538120 PLXNA3P51805 1871 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 TET1Q8NFU7 2136 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 DFFAO00273 331 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 FGF10O15520 208 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 MAFKO60675 156 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 LPXNO60711 386 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 MOCS2O96007 188 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 CCNCP24863 283 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 SERPINB3P29508 390 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 CCNFP41002 786 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 RCN1Q15293 331 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 MUM1Q2TAK8 710 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 RASIP1Q5U651 963 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 CASC4Q6P4E1 433 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 TMEM154Q6P9G4 183 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 CES3Q6UWW8 571 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 MARK2Q7KZI7 788 aaKnown RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 OTOP3Q7RTS5 596 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 CCNJLQ8IV13 435 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 PHC3Q8NDX5 983 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 DTX3LQ8TDB6 740 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 WDR60Q8WVS4 1066 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 ZNF333Q96JL9 665 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 C1orf74Q96LT6 269 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 SUDS3Q9H7L9 328 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 DCLRE1BQ9H816 532 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 SPATS2LQ9NUQ6 558 aaKnown RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 MPP6Q9NZW5 540 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 LNPEPQ9UIQ6 1025 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 WASH4PA8MWX3 477 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 GSC2O15499 205 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 KRT37O76014 449 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 EFEMP2O95967 443 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 HAPLN1P10915 354 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 YWHAQP27348 245 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 COG7P83436 770 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 RNF220Q5VTB9 566 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 LMNTD2Q8IXW0 634 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 ARHGAP18Q8N392 663 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 USP33Q8TEY7 942 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 PTCD3Q96EY7 689 aaKnown RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 ANKRD27Q96NW4 1050 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 IL12RB2Q99665 862 aa10.93□□□□□ -0.66
CLIP1-210ENST00000538120 NOL6Q9H6R4 1146 aaKnown RBP10.93□□□□□ -0.66
CLIP1-210ENST00000538120 CATSPERBQ9H7T0 1116 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms