RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DNA2P51530 1060 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CLDN2P57739 230 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ERVPABLB-1P60509 514 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC6A3Q01959 620 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DEUP1Q05D60 604 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 EIF4EBP2Q13542 120 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARSIQ5FYB1 569 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SEL1L3Q68CR1 1132 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RETSATQ6NUM9 610 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GJB7Q6PEY0 223 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TRIM65Q6PJ69 517 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OLFML1Q6UWY5 402 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GCNT7Q6ZNI0 430 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 Q6ZSR6 202 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC26A9Q7LBE3 791 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TFAP2DQ7Z6R9 452 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PARGQ86W56 976 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZDHHC17Q8IUH5 632 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OR52K2Q8NGK3 314 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OR2A12Q8NGT7 310 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 IFI44Q8TCB0 444 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARRDC3Q96B67 414 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CRACR2AQ9BSW2 395 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OSBPL2Q9H1P3 480 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TNKS2Q9H2K2 1166 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 POLR1BQ9H9Y6 1135 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TMEM51Q9NW97 253 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OR51B4Q9Y5P0 310 aa13.26□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARID1BQ8NFD5 2236 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PPP1R3GB7ZBB8 358 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NEMP1O14524 444 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SCAMP1O15126 338 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 KLK10O43240 276 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 LEFTY1O75610 366 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CNTN5O94779 1100 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ENDOD1O94919 500 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MT-CO1P00395 513 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ERBB2P04626 1255 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 OR1E1P30953 314 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RABIFP47224 123 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 LSSP48449 732 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SGCGQ13326 291 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 EXOC3L4Q17RC7 722 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF542PQ5EBM4 170 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C3orf38Q5JPI3 329 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ARHGAP40Q5TG30 622 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZCCHC8Q6NZY4 707 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 KYAT3Q6YP21 454 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C14orf80Q86SX3 495 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZSCAN30Q86W11 494 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ELOA2Q8IYF1 753 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 RYBPQ8N488 228 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CHST14Q8NCH0 376 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 GLMNQ92990 594 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FEM1CQ96JP0 617 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SPON2Q9BUD6 331 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 HDAC8Q9BY41 377 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC17A9Q9BYT1 436 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PIGVQ9NUD9 493 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 WDR70Q9NW82 654 aa13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 HELZ2Q9BYK8 2649 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-207ENST00000535958 BPTFQ12830 3046 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TDRD6O60522 2096 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DOCK9Q9BZ29 2069 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CPED1A4D0V7 1026 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 K7ERQ8 282 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 K7ESM1 405 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FPGTO14772 594 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SMAD6O43541 496 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 NEBLO76041 1014 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 F9P00740 461 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ADRB3P13945 408 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PDE1CQ14123 709 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MORC3Q14149 939 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 C5orf22Q49AR2 442 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ALFQ53S48 1182 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FAM102AQ5T9C2 384 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CDCP2Q5VXM1 449 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 DPY19L3Q6ZPD9 716 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ABI3BPQ7Z7G0 1075 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 SLC22A18ASQ8N1D0 253 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 FAM181AQ8N9Y4 354 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 MSANTD4Q8NCY6 345 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF548Q8NEK5 533 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 ZNF397Q8NF99 534 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 TPCN2Q8NHX9 752 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 VCPIP1Q96JH7 1222 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 PSMB7Q99436 277 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 IL12RB2Q99665 862 aa13.24□□□□□ -0.29
TNFRSF1A-207ENST00000535958 HEPHQ9BQS7 1158 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms