RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	C19orf48	Q6RUI8	117 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	ERN2	Q76MJ5	926 aa	Known RBP	18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	HORMAD1	Q86X24	394 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	SPATS2	Q86XZ4	545 aa	Known RBP	18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	OR7D4	Q8NG98	312 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	NXPE2	Q96DL1	559 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	MYOC	Q99972	504 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	CEP44	Q9C0F1	390 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	TNKS2	Q9H2K2	1166 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	TMPRSS4	Q9NRS4	437 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	TMEM59L	Q9UK28	342 aa		18.87	■□□□□ 0.61
CTSB-233	ENST00000534636	SMAD6	O43541	496 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	GFPT2	O94808	682 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	ENDOD1	O94919	500 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	THEGL	P0DJG4	465 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	PRLR	P16471	622 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	HNRNPA2B1	P22626	353 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	SDC4	P31431	198 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	SERPINH1	P50454	418 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	DNA2	P51530	1060 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	SLC20A2	Q08357	652 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	ILK	Q13418	452 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	CDO1	Q16878	200 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	ARSI	Q5FYB1	569 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	PCDH20	Q8N6Y1	951 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	TMEM145	Q8NBT3	493 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	ARRDC3	Q96B67	414 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	HDAC8	Q9BY41	377 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	CA5B	Q9Y2D0	317 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	DAAM1	Q9Y4D1	1078 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	LOC400499	M0QZD8	3231 aa		18.86	■□□□□ 0.61
CTSB-233	ENST00000534636	MYLK	Q15746	1914 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	SDC3	O75056	442 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	LEFTY1	O75610	366 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	CKMT2	P17540	419 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	GLDC	P23378	1020 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	NEK3	P51956	506 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	CDR2	Q01850	454 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	GNA12	Q03113	381 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	CAMK2B	Q13554	666 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	COL28A1	Q2UY09	1125 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	RWDD4	Q6NW29	188 aa	Known RBP	18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	TRIM72	Q6ZMU5	477 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	DPY19L3	Q6ZPD9	716 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	DRC7	Q8IY82	874 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	EMC1	Q8N766	993 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	CHST14	Q8NCH0	376 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	ENOX1	Q8TC92	643 aa	Known RBP	18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	KLK6	Q92876	244 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	VPS16	Q9H269	839 aa		18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.85	■□□□□ 0.61
CTSB-233	ENST00000534636	SOX5	P35711	763 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	GEMIN4	P57678	1058 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	POLR2F	P61218	127 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	ZNF284	Q2VY69	593 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	HES3	Q5TGS1	186 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	KIAA1161	Q6NSJ0	714 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	TRNP1	Q6NT89	227 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	FBXL19	Q6PCT2	694 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	BNIPL	Q7Z465	357 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	ANKRD20A12P	Q8NF67	263 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	FAM174A	Q8TBP5	190 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	SLC20A1	Q8WUM9	679 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	HEPH	Q9BQS7	1158 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	C11orf70	Q9BRQ4	267 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	CALN1	Q9BXU9	219 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	GAN	Q9H2C0	597 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	FZD3	Q9NPG1	666 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	SCUBE2	Q9NQ36	999 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	OR12D3	Q9UGF7	316 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	NOCT	Q9UK39	431 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	HPCAL4	Q9UM19	191 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	CHD5	Q8TDI0	1954 aa		18.84	■□□□□ 0.61
CTSB-233	ENST00000534636	MMP8	P22894	467 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	ITGB7	P26010	798 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	MAPKAPK2	P49137	400 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	RPS21	P63220	83 aa	Known RBP	18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	DAB2	P98082	770 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	KRT31	Q15323	416 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	SYCP1	Q15431	976 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	CARD16	Q5EG05	197 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	RYBP	Q8N488	228 aa	Predicted RBP	18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	RXFP2	Q8WXD0	754 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	TSC1	Q92574	1164 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	RETREG1	Q9H6L5	497 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	ZDHHC6	Q9H6R6	413 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	KLHL11	Q9NVR0	708 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	FCF1	Q9Y324	198 aa	Known RBP	18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	BAHCC1	Q9P281	2608 aa		18.83	■□□□□ 0.6
CTSB-233	ENST00000534636	CXorf51A	A0A1B0GTR3	108 aa		18.82	■□□□□ 0.6
CTSB-233	ENST00000534636		A6NNZ2	444 aa		18.82	■□□□□ 0.6
CTSB-233	ENST00000534636	CYP1A1	P04798	512 aa	Predicted RBP	18.82	■□□□□ 0.6
CTSB-233	ENST00000534636	ALPPL2	P10696	532 aa		18.82	■□□□□ 0.6
CTSB-233	ENST00000534636	ADRB3	P13945	408 aa		18.82	■□□□□ 0.6
CTSB-233	ENST00000534636	STAT1	P42224	750 aa		18.82	■□□□□ 0.6
CTSB-233	ENST00000534636	NSF	P46459	744 aa	Known RBP	18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms