RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 NPIPB13A6NJU9 1138 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 NPIPB5A8MRT5 1133 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 NPIPB4C9JG80 1138 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 HEXIM1O94992 359 aaKnown RBP3.15□□□□□ -1.91
BRCA2-205ENST00000533776 CGAP01215 116 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 HLA-DQA2P01906 255 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 FCGR2AP12318 317 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 ABCB4P21439 1286 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 CLCNKBP51801 687 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 CDK18Q07002 472 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SNTA1Q13424 505 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 PICALMQ13492 652 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SF3B4Q15427 424 aaKnown RBP eCLIP3.15□□□□□ -1.91
BRCA2-205ENST00000533776 MRGPRG-AS1Q2M3A8 158 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 ZACNQ401N2 412 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 MAP9Q49MG5 647 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 GXYLT1Q4G148 440 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SYTL3Q4VX76 610 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 CCDC181Q5TID7 509 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 STYXQ8WUJ0 223 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 FAR1Q8WVX9 515 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 HES6Q96HZ4 224 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 CCDC138Q96M89 665 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SLC25A33Q9BSK2 321 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 LHPPQ9H008 270 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SDF2L1Q9HCN8 221 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SEL1LQ9UBV2 794 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 MALT1Q9UDY8 824 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 PHTF1Q9UMS5 762 aa3.15□□□□□ -1.91
BRCA2-205ENST00000533776 SAA2-SAA4A0A096LPE2 208 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 C17orf102A2RUQ5 167 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 PRR23AA6NEV1 266 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 DDTLA6NHG4 134 aaPredicted RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 KDM4EB2RXH2 506 aaPredicted RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 EYA2O00167 538 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 TNFRSF6BO95407 300 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 SP1P08047 785 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 LYL1P12980 280 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 GYS1P13807 737 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 ENO3P13929 434 aaPredicted RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 DAOP14920 347 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 ACSM2AQ08AH3 577 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 ALKBH1Q13686 389 aaKnown RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 EFHC1Q5JVL4 640 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 TYW3Q6IPR3 259 aaKnown RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 DSTYKQ6XUX3 929 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 SERPINA11Q86U17 422 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 WDR5BQ86VZ2 330 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 CCDC146Q8IYE0 955 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 SPATA20Q8TB22 786 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 TMEM163Q8TC26 289 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 C2CD4CQ8TF44 421 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 FRG2BQ96QU4 278 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 NPAS1Q99742 590 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 FNIP2Q9P278 1114 aa3.14□□□□□ -1.91
BRCA2-205ENST00000533776 AGO1Q9UL18 857 aaKnown RBP3.14□□□□□ -1.91
BRCA2-205ENST00000533776 MST1RQ04912 1400 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 TMEM247A6NEH6 219 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 BMPR1BO00238 502 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 SYN3O14994 580 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 RNMTO43148 476 aaKnown RBP3.13□□□□□ -1.91
BRCA2-205ENST00000533776 DDAH2O95865 285 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 AFPP02771 609 aaKnown RBP3.13□□□□□ -1.91
BRCA2-205ENST00000533776 MMP3P08254 477 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 CKMT1AP12532 417 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 MXI1P50539 228 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 AK2P54819 239 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 MYBPHQ13203 477 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 CTTNQ14247 550 aaKnown RBP3.13□□□□□ -1.91
BRCA2-205ENST00000533776 TRIM60Q495X7 471 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 CCSAPQ6IQ19 270 aaPredicted RBP3.13□□□□□ -1.91
BRCA2-205ENST00000533776 NOL8Q76FK4 1167 aaKnown RBP3.13□□□□□ -1.91
BRCA2-205ENST00000533776 C11orf96Q7Z7L8 435 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 SRLQ86TD4 932 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 TRIM74Q86UV6 250 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 TRIM73Q86UV7 250 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 SCN4BQ8IWT1 228 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 SYTL1Q8IYJ3 562 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 ZDHHC23Q8IYP9 409 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 OR1N1Q8NGS0 311 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 HDAC7Q8WUI4 952 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 TNIP3Q96KP6 325 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 IL17FQ96PD4 163 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 MYD88Q99836 296 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 CADM1Q9BY67 442 aaKnown RBP3.13□□□□□ -1.91
BRCA2-205ENST00000533776 BRD8Q9H0E9 1235 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 GAREM1Q9H706 876 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 ACAD9Q9H845 621 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 CHST12Q9NRB3 414 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 UPB1Q9UBR1 384 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 RCE1Q9Y256 329 aa3.13□□□□□ -1.91
BRCA2-205ENST00000533776 PLIN1O60240 522 aa3.12□□□□□ -1.91
BRCA2-205ENST00000533776 DDR1Q08345 913 aa3.12□□□□□ -1.91
BRCA2-205ENST00000533776 STARD3Q14849 445 aa3.12□□□□□ -1.91
BRCA2-205ENST00000533776 RPS6KA2Q15349 733 aa3.12□□□□□ -1.91
BRCA2-205ENST00000533776 TBRG1Q3YBR2 411 aa3.12□□□□□ -1.91
BRCA2-205ENST00000533776 SYCP2LQ5T4T6 812 aa3.12□□□□□ -1.91
BRCA2-205ENST00000533776 ATPAF1Q5TC12 328 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms