RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 CDK7P50613 346 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SEC13P55735 322 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 FAM189BP81408 668 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 TNK2Q07912 1038 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CACNB2Q08289 660 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 MGAT5Q09328 741 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 FAAP100Q0VG06 881 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SMARCB1Q12824 385 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 IFRD2Q12894 506 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 LPIN1Q14693 890 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CRYMQ14894 314 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 TBCCQ15814 346 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SNCBQ16143 134 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 PCSK7Q16549 785 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 NFE2Q16621 373 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 TEX44Q53QW1 395 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 GRTP1Q5TC63 336 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SYPL2Q5VXT5 272 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 OVOS1Q6IE37 1185 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 TIGD7Q6NT04 549 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 IGF2-ASQ6U949 168 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CXCL17Q6UXB2 119 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CD300LGQ6UXG3 332 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CAPN12Q6ZSI9 719 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 DENND5BQ6ZUT9 1274 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 HFE2Q6ZVN8 426 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 OTOAQ7RTW8 1153 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CCDC91Q7Z6B0 441 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 RNF180Q86T96 592 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 TMEM135Q86UB9 458 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CTAGE3PQ8IX95 158 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 DCP1BQ8IZD4 617 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 ZNF567Q8N184 647 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 FITM2Q8N6M3 262 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 PPM1NQ8N819 430 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SLC43A3Q8NBI5 491 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 DQX1Q8TE96 717 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 DEPDC1BQ8WUY9 529 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 ARNTL2Q8WYA1 636 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 KLHL29Q96CT2 875 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CFAP36Q96G28 342 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 OXNAD1Q96HP4 312 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SERAC1Q96JX3 654 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 RMDN2Q96LZ7 410 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 ANKRD27Q96NW4 1050 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SERPINB11Q96P15 392 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SRPK1Q96SB4 655 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 RTP3Q9BQQ7 232 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 TSSK1BQ9BXA7 367 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 FTHL17Q9BXU8 183 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 IL22Q9GZX6 179 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 SMG9Q9H0W8 520 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 FBXO44Q9H4M3 255 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 WDCPQ9H6R7 721 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 ELAC1Q9H777 363 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CATSPERBQ9H7T0 1116 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 AGO3Q9H9G7 860 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 MRM3Q9HC36 420 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 CASS4Q9NQ75 786 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 RGS18Q9NS28 235 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 DDIT4Q9NX09 232 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 MIOSQ9NXC5 875 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 KCNK4Q9NYG8 393 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 BFARQ9NZS9 450 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 GRID1Q9ULK0 1009 aa5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 MTO1Q9Y2Z2 717 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-210ENST00000532925 NUP205Q92621 2012 aa5.84□□□□□ -1.48
ATPAF1-210ENST00000532925 SHROOM3Q8TF72 1996 aa5.84□□□□□ -1.48
ATPAF1-210ENST00000532925 FAM92AA1XBS5 289 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 CASTOR2A6NHX0 329 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 MEIS3P2A8K0S8 358 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 TNFRSF10BO14763 440 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 TIMM44O43615 452 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 CREB3O43889 395 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 MGEA5O60502 916 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 SNNO75324 88 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 H2AFYO75367 372 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 ANXA9O76027 345 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 B3GAT3O94766 335 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 LRIG2O94898 1065 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 ALX3O95076 343 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 SNUPNO95149 360 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 MAP3K6O95382 1288 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 PGK1P00558 417 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 APOA4P06727 396 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 CSH1P0DML2 217 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 CSH2P0DML3 217 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 SRGAP2BP0DMP2 458 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 MYL4P12829 197 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 ACAT1P24752 427 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 GRK2P25098 689 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 PSMB4P28070 264 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 CD52P31358 61 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 CCR1P32246 355 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 THPOP40225 353 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 NDUFV1P49821 464 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 HK2P52789 917 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 PRKAA2P54646 552 aa5.83□□□□□ -1.48
ATPAF1-210ENST00000532925 NRLP54845 237 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms