RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TMPRSS12Q86WS5 348 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 HORMAD1Q86X24 394 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 GRIN3AQ8TCU5 1115 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 TSC1Q92574 1164 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 HDAC8Q9BY41 377 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 CEP44Q9C0F1 390 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 ATP13A1Q9HD20 1204 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 FAM207AQ9NSI2 230 aaPredicted RBP17.19■□□□□ 0.34
CPSF1-207ENST00000531727 IL36AQ9UHA7 158 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 DAAM1Q9Y4D1 1078 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 GPSM3Q9Y4H4 160 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 DOCK9Q9BZ29 2069 aa17.19■□□□□ 0.34
CPSF1-207ENST00000531727 RNF103O00237 685 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 EPHB6O15197 1021 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 SLC31A1O15431 190 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 ZNF821O75541 412 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-207ENST00000531727 RFPL3O75679 317 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 CDK4P11802 303 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 PRLRP16471 622 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 ACADVLP49748 655 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 ARF5P84085 180 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 NRG1Q02297 640 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-207ENST00000531727 C15orf59Q2T9L4 293 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-207ENST00000531727 ZNF284Q2VY69 593 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 RAB6CQ53S08 254 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 TRIM72Q6ZMU5 477 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 DPY19L3Q6ZPD9 716 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 ERN2Q76MJ5 926 aaKnown RBP17.18■□□□□ 0.34
CPSF1-207ENST00000531727 DRC7Q8IY82 874 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 PCDH20Q8N6Y1 951 aaKnown RBP17.18■□□□□ 0.34
CPSF1-207ENST00000531727 PDCD7Q8N8D1 485 aaKnown RBP17.18■□□□□ 0.34
CPSF1-207ENST00000531727 TMEM145Q8NBT3 493 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 SLC30A5Q8TAD4 765 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 RXFP2Q8WXD0 754 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 KLK6Q92876 244 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 KLHDC7BQ96G42 594 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 PPP1R16AQ96I34 528 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 RAB6CQ9H0N0 254 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 NLRC4Q9NPP4 1024 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 OR12D3Q9UGF7 316 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 CA5BQ9Y2D0 317 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 WASF2Q9Y6W5 498 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 PKD1L2Q7Z442 2459 aa17.18■□□□□ 0.34
CPSF1-207ENST00000531727 ADAMTS20P59510 1910 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 C2CD4BA6NLJ0 364 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 LEFTY1O75610 366 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 SDC4P31431 198 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 ADRA1BP35368 520 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 CDO1Q16878 200 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 ARL13BQ3SXY8 428 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 CCDC14Q49A88 953 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 JOSD2Q8TAC2 188 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 MYOCQ99972 504 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 C11orf70Q9BRQ4 267 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 RETREG1Q9H6L5 497 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 ZFR2Q9UPR6 939 aaKnown RBP17.17■□□□□ 0.34
CPSF1-207ENST00000531727 SIK3Q9Y2K2 1263 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 RAXQ9Y2V3 346 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 DSPP15924 2871 aaKnown RBP17.17■□□□□ 0.34
CPSF1-207ENST00000531727 FAM208BQ5VWN6 2430 aa17.17■□□□□ 0.34
CPSF1-207ENST00000531727 LAMA5O15230 3695 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 CXorf51AA0A1B0GTR3 108 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 SDC3O75056 442 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 PCDH8O95206 1070 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 THEGLP0DJG4 465 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 HNRNPA2B1P22626 353 aaKnown RBP17.16■□□□□ 0.34
CPSF1-207ENST00000531727 ITGB7P26010 798 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 AKT2P31751 481 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 HNF1BP35680 557 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 ETFBP38117 255 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 STAT1P42224 750 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 PTPN9P43378 593 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 NEK3P51956 506 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 CYP4F3Q08477 520 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 PTP4A2Q12974 167 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 CARD16Q5EG05 197 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
CPSF1-207ENST00000531727 STRADAQ7RTN6 431 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 PHLDB2Q86SQ0 1253 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 GPT2Q8TD30 523 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 HEPHQ9BQS7 1158 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 OSBPL2Q9H1P3 480 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 FZD3Q9NPG1 666 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 FANCLQ9NW38 375 aa17.16■□□□□ 0.34
CPSF1-207ENST00000531727 CHD5Q8TDI0 1954 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 GJB6O95452 261 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 CD160O95971 181 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 UNGP13051 313 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 ADRB3P13945 408 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 RHOQP17081 205 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 CKMT2P17540 419 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 ACVRL1P37023 503 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 MAPKAPK2P49137 400 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 DNA2P51530 1060 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 CCNHP51946 323 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 COPB1P53618 953 aaKnown RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 GSCP56915 257 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-207ENST00000531727 ILKQ13418 452 aa17.15■□□□□ 0.34
CPSF1-207ENST00000531727 TMEM259Q4ZIN3 620 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms