RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 RTN2O75298 545 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 GJB3O75712 270 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 PCDH8O95206 1070 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 GJB6O95452 261 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 MT-CO1P00395 513 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 FTLP02792 175 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 ZNF135P52742 658 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 YBEYP58557 167 aaPredicted RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 TPI1P60174 286 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 FIGNQ5HY92 759 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 FBXL19Q6PCT2 694 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 ERN2Q76MJ5 926 aaKnown RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 ZSCAN30Q86W11 494 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 TRIM69Q86WT6 500 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 CCDC185Q8N715 623 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 BAP1Q92560 729 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 ISG20Q96AZ6 181 aaKnown RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 LRIG1Q96JA1 1093 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 SLC6A18Q96N87 628 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 CNTNAP3BQ96NU0 1288 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 CNTNAP3Q9BZ76 1288 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 CBX8Q9HC52 389 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
C11orf54-210ENST00000531516 LAMA1P25391 3075 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 NUP205Q92621 2012 aa12.83□□□□□ -0.36
C11orf54-210ENST00000531516 K7ERQ8 282 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 TLR4O00206 839 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 NEMP1O14524 444 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 LATO43561 262 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 BUB1O43683 1085 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 PCDHGA12O60330 932 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 ITGAVP06756 1048 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 MAT2AP31153 395 aaKnown RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 AKT2P31751 481 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 DRD3P35462 400 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 PRKCIP41743 596 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 CTSKP43235 329 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 NEK3P51956 506 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 RPL7AP62424 266 aaKnown RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 FANCCQ00597 558 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 NR1I3Q14994 352 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 IQCB1Q15051 598 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 PARP15Q460N3 678 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 MANEALQ5VSG8 457 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 IQCHQ86VS3 1027 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 MFSD2AQ8NA29 543 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 FAM174AQ8TBP5 190 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 ARHGEF2Q92974 986 aaKnown RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 ZNF653Q96CK0 615 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 FEM1CQ96JP0 617 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 ELF4Q99607 663 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 HDAC8Q9BY41 377 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 HECAQ9UBI9 543 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 CNOT8Q9UFF9 292 aaKnown RBP12.82□□□□□ -0.36
C11orf54-210ENST00000531516 SARDHQ9UL12 918 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 FZD10Q9ULW2 581 aa12.82□□□□□ -0.36
C11orf54-210ENST00000531516 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 CBFA2T2O43439 604 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 SMAD6O43541 496 aaKnown RBP12.81□□□□□ -0.36
C11orf54-210ENST00000531516 KDELR3O43731 214 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 LEFTY1O75610 366 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 POP4O95707 220 aaKnown RBP12.81□□□□□ -0.36
C11orf54-210ENST00000531516 IGSF6O95976 241 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 GSRP00390 522 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 TPM1P09493 284 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 XPAP23025 273 aaPredicted RBP12.81□□□□□ -0.36
C11orf54-210ENST00000531516 ITGB7P26010 798 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 ACVRL1P37023 503 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 CCNHP51946 323 aaPredicted RBP12.81□□□□□ -0.36
C11orf54-210ENST00000531516 SGCGQ13326 291 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 MAMLD1Q13495 774 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 TSR1Q2NL82 804 aaKnown RBP12.81□□□□□ -0.36
C11orf54-210ENST00000531516 AGBL4Q5VU57 503 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 PLEKHA7Q6IQ23 1121 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 DPY19L3Q6ZPD9 716 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 LUZP1Q86V48 1076 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 NLRP14Q86W24 1093 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 HORMAD1Q86X24 394 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 RAB7BQ96AH8 199 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 FAM131CQ96AQ9 280 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 GDAP1L1Q96MZ0 367 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
C11orf54-210ENST00000531516 TM6SF2Q9BZW4 377 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 ZDHHC6Q9H6R6 413 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 ERVMER34-1Q9H9K5 563 aa12.81□□□□□ -0.36
C11orf54-210ENST00000531516 IL21RQ9HBE5 538 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms