RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 PRKCBP05771 671 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SPARCP09486 303 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 FAM153BP0C7A2 387 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ETS1P14921 441 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 FSHRP23945 695 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CNTFP26441 200 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SDC2P34741 201 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 MLLT6P55198 1093 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SCN1BQ07699 218 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PTGES3Q15185 160 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 NR6A1Q15406 480 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PABPC1LQ4VXU2 614 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 GET4Q7L5D6 327 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SYNPOQ8N3V7 929 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PRMT6Q96LA8 375 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PPP1R16BQ96T49 567 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PDGFDQ9GZP0 370 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 STN1Q9H668 368 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TREM1Q9NP99 234 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PNPLA3Q9NST1 481 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 GMPPBQ9Y5P6 360 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ANXA9O76027 345 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PDGFRBP09619 1106 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 NR2F6P10588 404 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 UQCRBP14927 111 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PDGFRAP16234 1089 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SP100P23497 879 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CREMQ03060 361 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TWF1Q12792 350 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PRKG2Q13237 762 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PAGE2Q7Z2X7 111 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SLC22A9Q8IVM8 553 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ZNF276Q8N554 614 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SDR42E1Q8WUS8 393 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 FATE1Q969F0 183 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ZNF560Q96MR9 790 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 RIT2Q99578 217 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 AASSQ9UDR5 926 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 UTYO14607 1347 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ZSCAN5BA6NJL1 495 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 I3L521 148 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CCRL2O00421 344 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TLL1O43897 1013 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ORC5O43913 435 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 LCP1P13796 627 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 IFNAR1P17181 557 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TGM2P21980 687 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 FDFT1P37268 417 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TBRG1Q3YBR2 411 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 MTSS1LQ765P7 747 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SLCO6A1Q86UG4 719 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CLYBLQ8N0X4 340 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TMEM132CQ8N3T6 1108 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 IKZF3Q9UKT9 509 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ANKRD6Q9Y2G4 727 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PCDHB6Q9Y5E3 794 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ATXN2Q99700 1313 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TRIM64A6NGJ6 449 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TRIM64BA6NI03 449 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CLUP10909 449 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SRCP12931 536 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 RRM1P23921 792 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 RBM34P42696 430 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ALDH1A3P47895 512 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PIK3CGP48736 1102 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 PHC1P78364 1004 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ILF3Q12906 894 aaKnown RBP eCLIP7.33□□□□□ -1.242e-7■■□□□ 13.8
CTNND1-229ENST00000531014 SLC18A3Q16572 532 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SLC5A9Q2M3M2 681 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 IL31Q6EBC2 164 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ANO7Q6IWH7 933 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 ZNF677Q86XU0 584 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 EIF1ADQ8N9N8 165 aaKnown RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SLC35G2Q8TBE7 412 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SPATA18Q8TC71 538 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 USP7Q93009 1102 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 C2orf40Q9H1Z8 148 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CATSPERBQ9H7T0 1116 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 FAM217BQ9NTX9 383 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-229ENST00000531014 CDH7Q9ULB5 785 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
CTNND1-229ENST00000531014 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 SSU72P8A0A1W2PR75 194 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 C17orf102A2RUQ5 167 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 CASKO14936 926 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 SULT1B1O43704 296 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 PRKD3O94806 890 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 SERPINF2P08697 491 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 RBP3P10745 1247 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 SLC2A4P14672 509 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 CPA3P15088 417 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 CDK9P50750 372 aaKnown RBP7.32□□□□□ -1.24
CTNND1-229ENST00000531014 HTRA3P83110 453 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 MYBPC1Q00872 1141 aa7.32□□□□□ -1.24
CTNND1-229ENST00000531014 PRKAA1Q13131 559 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms