RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 LRRC53A6NM62 1247 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 I6L893 689 aaPredicted RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 YKT6O15498 198 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 PLRG1O43660 514 aaKnown RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 RTN2O75298 545 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 GJB3O75712 270 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 RNF8O76064 485 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 FTLP02792 175 aaPredicted RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 IGHV4-34P06331 123 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 MYBL1P10243 752 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 CD59P13987 128 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 CD38P28907 300 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 GGCXP38435 758 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 IRAK1P51617 712 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 ZNF135P52742 658 aaPredicted RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 ADPRHP54922 357 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 HDAC4P56524 1084 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 UBASH3AP57075 661 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 YBEYP58557 167 aaPredicted RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 KLHL30Q0D2K2 578 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 ZNF252P-AS1Q0IIN9 211 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 STAT4Q14765 748 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 POLD3Q15054 466 aaPredicted RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 TRIP6Q15654 476 aaKnown RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 ZNF423Q2M1K9 1284 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 INAVAQ3KP66 663 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 CARD16Q5EG05 197 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 Q6ZVU0 165 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 IQCHQ86VS3 1027 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 PSTKQ8IV42 348 aaKnown RBP9.81□□□□□ -0.84
CHD7-208ENST00000528280 DRC7Q8IY82 874 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 OXR1Q8N573 874 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 AADATQ8N5Z0 425 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 OR2A12Q8NGT7 310 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 PSMB7Q99436 277 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 EPAS1Q99814 870 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 FUCA2Q9BTY2 467 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 HDAC8Q9BY41 377 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 HAUS4Q9H6D7 363 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 IL36AQ9UHA7 158 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 SNX10Q9Y5X0 201 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 SCINQ9Y6U3 715 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 LOC400499M0QZD8 3231 aa9.81□□□□□ -0.84
CHD7-208ENST00000528280 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 A0A1W2PQJ5 194 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 TCRBV5S1A1TA0A578 114 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SYCE3A1L190 88 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 PRAMEF26H0Y7S4 382 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 KPNA3O00505 521 aaPredicted RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 FGF10O15520 208 aaPredicted RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 FLRT2O43155 660 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 LATO43561 262 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 KDELR3O43731 214 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 BNIP3LO60238 219 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SH3BP5O60239 455 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 PCDHGA12O60330 932 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SNAP91O60641 907 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 RAMP2O60895 175 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 ZMPSTE24O75844 475 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 LRIG2O94898 1065 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 POP4O95707 220 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 MT-CO1P00395 513 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 VAV1P15498 845 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 RRM1P23921 792 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 EPHB2P29323 1055 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 DRD3P35462 400 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SERPINH1P50454 418 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 SNRPD1P62314 119 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 SIM1P81133 766 aaPredicted RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 FANCCQ00597 558 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 RAD51Q06609 339 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 CNTN1Q12860 1018 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 MAMLD1Q13495 774 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 KIF19Q2TAC6 998 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SETMARQ53H47 684 aaPredicted RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 INO80DQ53TQ3 878 aaPredicted RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 MANEALQ5VSG8 457 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 PLEKHA7Q6IQ23 1121 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 GLRX5Q86SX6 157 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 NLRP14Q86W24 1093 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 TRIM69Q86WT6 500 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 NAXDQ8IW45 347 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 MFSD2AQ8NA29 543 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 OR7D4Q8NG98 312 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 FNIP1Q8TF40 1166 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SETD7Q8WTS6 366 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 ARHGEF2Q92974 986 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 FEM1CQ96JP0 617 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SERAC1Q96JX3 654 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 NAP1L5Q96NT1 182 aaPredicted RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 MCEEQ96PE7 176 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 HEPHQ9BQS7 1158 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 ERVMER34-1Q9H9K5 563 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 CBX8Q9HC52 389 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 FSCN3Q9NQT6 498 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 AASDHPPTQ9NRN7 309 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 TMPRSS4Q9NRS4 437 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 ZNF212Q9UDV6 495 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 FZD10Q9ULW2 581 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms