RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 CLDN11O75508 207 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 GJB6O95452 261 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 PAK4O96013 591 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 MT-CO1P00395 513 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 ITGB2P05107 769 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 ITGA2BP08514 1039 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 ITGB6P18564 788 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 CCR1P32246 355 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 RABIFP47224 123 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 RPS21P63220 83 aaKnown RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 KRT83P78385 493 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 MTA1Q13330 715 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 AUHQ13825 339 aaKnown RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 NR0B2Q15466 257 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 C5orf22Q49AR2 442 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 SEL1L3Q68CR1 1132 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 OR6B2Q6IFH4 312 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 ATG14Q6ZNE5 492 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 PTAR1Q7Z6K3 402 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 GLMNQ92990 594 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 RPRD1AQ96P16 312 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 IL12RB2Q99665 862 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 BOCQ9BWV1 1114 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 METTL14Q9HCE5 456 aaKnown RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
SRPRA-202ENST00000527817 KLF15Q9UIH9 416 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 PCDHGA7Q9Y5G6 932 aa12.59□□□□□ -0.39
SRPRA-202ENST00000527817 PMS2P1A4D2B8 440 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 RNF103O00237 685 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 SUV39H1O43463 412 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 CALCAP01258 141 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 SFTPCP11686 197 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 JUNDP17535 347 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 RPIAP49247 311 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 FMO5P49326 533 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 NDUFA8P51970 172 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 PITX1P78337 314 aaPredicted RBP12.58□□□□□ -0.4
SRPRA-202ENST00000527817 CDK17Q00537 523 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 FGL2Q14314 439 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 MEA1Q16626 185 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 PERM1Q5SV97 790 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 KIAA1161Q6NSJ0 714 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 USP53Q70EK8 1073 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 PARGQ86W56 976 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 PPM1KQ8N3J5 372 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 ATP11CQ8NB49 1132 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 BTN2A2Q8WVV5 523 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 KAT5Q92993 513 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 NAT6Q93015 286 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 SGF29Q96ES7 293 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 LIN37Q96GY3 246 aaPredicted RBP12.58□□□□□ -0.4
SRPRA-202ENST00000527817 ACSL6Q9UKU0 697 aa12.58□□□□□ -0.4
SRPRA-202ENST00000527817 TMX2-CTNND1H3BSU7 103 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 NTN3O00634 580 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 RAD51BO15315 384 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 AP1G1O43747 822 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 NOBOXO60393 691 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 AFPP02771 609 aaKnown RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 NTRK1P04629 796 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 GLI1P08151 1106 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 SLC5A2P31639 672 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 PRCPP42785 496 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 CLCN6P51797 869 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 CDH4P55283 916 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 GCNT1Q02742 428 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 CENPCQ03188 943 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 EIF2B5Q13144 721 aaKnown RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 EIF3IQ13347 325 aaKnown RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 COBLL1Q53SF7 1204 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 SMYD4Q8IYR2 804 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 CHST14Q8NCH0 376 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 LMX1AQ8TE12 382 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 ASB12Q8WXK4 309 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 PPP1R16AQ96I34 528 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 PSMB7Q99436 277 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 KLF6Q99612 283 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 TSG101Q99816 390 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 C2orf49Q9BVC5 232 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-202ENST00000527817 C1QTNF2Q9BXJ5 285 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 TRIM4Q9C037 500 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 MUC3BQ9H195 1237 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 SPASTQ9UBP0 616 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 VANGL2Q9ULK5 521 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 CNTN6Q9UQ52 1028 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 FADS3Q9Y5Q0 445 aa12.57□□□□□ -0.4
SRPRA-202ENST00000527817 TEX15Q9BXT5 2789 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms