RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SYPL2Q5VXT5 272 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 FBXO46Q6PJ61 603 aaPredicted RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 TRIM48Q8IWZ4 208 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 ARL14EPQ8N8R7 260 aaPredicted RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 ANKRD6Q9Y2G4 727 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 CPQQ9Y646 472 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 SKAP2O75563 359 aaPredicted RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 CCNCP24863 283 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 ATXN1P54253 815 aaKnown RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 DPYSL2Q16555 572 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 GRAMD1BQ3KR37 738 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 C15orf39Q6ZRI6 1047 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 TTC7BQ86TV6 843 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 TMEM159Q96B96 161 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 CCDC124Q96CT7 223 aaKnown RBP15.29■□□□□ 0.04
USP47-207ENST00000527733 CRYL1Q9Y2S2 319 aa15.29■□□□□ 0.04
USP47-207ENST00000527733 FAM95CA0A1B0GW59 222 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 SLCO1B7G3V0H7 640 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TRIM13O60858 407 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 GPR17Q13304 367 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 ATAT1Q5SQI0 421 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 CACUL1Q86Y37 369 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TMEM40Q8WWA1 233 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 DNAJC16Q9Y2G8 782 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 SHBGP04278 402 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 ITGB6P18564 788 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TPSB2P20231 275 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 PROZP22891 400 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 ABL2P42684 1182 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 MAGEA9P43362 315 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TPSAB1Q15661 275 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TEDDM1Q5T9Z0 273 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TTC27Q6P3X3 843 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 CMASQ8NFW8 434 aaPredicted RBP15.28■□□□□ 0.04
USP47-207ENST00000527733 PLD4Q96BZ4 506 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 TUBGCP3Q96CW5 907 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 SPDL1Q96EA4 605 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 LNPEPQ9UIQ6 1025 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 NCKAP1Q9Y2A7 1128 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 NEDD8-MDP1E9PL57 170 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 MLNP12872 115 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 MAPKAPK2P49137 400 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 ITGA9Q13797 1035 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 DRICH1Q6PGQ1 229 aaPredicted RBP15.28■□□□□ 0.04
USP47-207ENST00000527733 RTL3Q8N8U3 475 aaKnown RBP15.28■□□□□ 0.04
USP47-207ENST00000527733 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
USP47-207ENST00000527733 ZNF333Q96JL9 665 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
USP47-207ENST00000527733 HCRTO43612 131 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 BANF1O75531 89 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 IFNA8P32881 189 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 CDK7P50613 346 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 CDH4P55283 916 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 GNA12Q03113 381 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 SEL1L3Q68CR1 1132 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 UNKQ9C0B0 810 aaKnown RBP15.27■□□□□ 0.04
USP47-207ENST00000527733 MAGEH1Q9H213 219 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 AVILO75366 819 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 SERPINE1P05121 402 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 IQCF3P0C7M6 154 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 ENO3P13929 434 aaPredicted RBP15.27■□□□□ 0.04
USP47-207ENST00000527733 SYN1P17600 705 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 MZF1P28698 734 aaPredicted RBP15.27■□□□□ 0.04
USP47-207ENST00000527733 DNAJB7Q7Z6W7 309 aaPredicted RBP15.27■□□□□ 0.04
USP47-207ENST00000527733 HAPLN3Q96S86 360 aa15.27■□□□□ 0.04
USP47-207ENST00000527733 LOC100653049A0A140TA62 436 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 C5orf60A6NFR6 353 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 C1QTNF3-AMACRE9PGA6 284 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 H3BMM5 538 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 PITPNM1O00562 1244 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 SOCS7O14512 581 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 KRT34O76011 436 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 STBD1O95210 358 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 LPOP22079 712 aaPredicted RBP15.27■□□□□ 0.03
USP47-207ENST00000527733 FMO4P31512 558 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 PRKAA2P54646 552 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 SETMARQ53H47 684 aaPredicted RBP15.27■□□□□ 0.03
USP47-207ENST00000527733 ARMC6Q6NXE6 501 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 OLFML1Q6UWY5 402 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 KYAT3Q6YP21 454 aaKnown RBP15.27■□□□□ 0.03
USP47-207ENST00000527733 AGGF1Q8N302 714 aaeCLIP15.27■□□□□ 0.03
USP47-207ENST00000527733 C8orf48Q96LL4 319 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 OSGEPL1Q9H4B0 414 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 ASB8Q9H765 288 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 RAD18Q9NS91 495 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 STOML1Q9UBI4 398 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 HEY2Q9UBP5 337 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 NR2E1Q9Y466 385 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 PIRTP0C851 137 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 CA9Q16790 459 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 UPP1Q16831 310 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.03
USP47-207ENST00000527733 ZNF280BQ86YH2 543 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 ARNTL2Q8WYA1 636 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms