RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 FMO5P49326 533 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 NFKB2Q00653 900 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 SRSF1Q07955 248 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 EIF4EBP2Q13542 120 aaPredicted RBP13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 AUHQ13825 339 aaKnown RBP13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 FGL2Q14314 439 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 TAF5Q15542 800 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 KYAT3Q6YP21 454 aaKnown RBP13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 RRAGAQ7L523 313 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 CLEC14AQ86T13 490 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 CHST14Q8NCH0 376 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 TMIEQ8NEW7 156 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 TPCN2Q8NHX9 752 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 FAM174AQ8TBP5 190 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 LMX1AQ8TE12 382 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 SYNDIG1Q9H7V2 258 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 GPR27Q9NS67 375 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 DDIT4Q9NX09 232 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 IPO11Q9UI26 975 aaKnown RBP13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 KLF15Q9UIH9 416 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 HS3ST2Q9Y278 367 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 HS3ST3A1Q9Y663 406 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 RP1P56715 2156 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 SPTY2D1-AS1A0A0U1RR47 76 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 FAM237AA0A1B0GTK4 181 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 EFSO43281 561 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 TCEA3O75764 348 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 PAK4O96013 591 aaPredicted RBP13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 PRNPP04156 253 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 ITGA2BP08514 1039 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 JUNDP17535 347 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 RRM1P23921 792 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 PRCPP42785 496 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 PMS1P54277 932 aaKnown RBP13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 RPS21P63220 83 aaKnown RBP13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 KRT83P78385 493 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 CDK17Q00537 523 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 PDE1CQ14123 709 aaPredicted RBP13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 LINC00303Q3SY05 128 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 ARSIQ5FYB1 569 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 ANKRD40Q6AI12 368 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 MED15Q96RN5 788 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 PSMB7Q99436 277 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 IL12RB2Q99665 862 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 ARHGAP9Q9BRR9 750 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 SLC4A5Q9BY07 1137 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 HDAC8Q9BY41 377 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 SLC17A9Q9BYT1 436 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 TNKS2Q9H2K2 1166 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 THAP9Q9H5L6 903 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 IL36AQ9UHA7 158 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 ATXN7L1Q9ULK2 861 aaPredicted RBP13.3□□□□□ -0.28
CLNS1A-207ENST00000527133 TRPM6Q9BX84 2022 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 CCDC187A0A096LP49 1063 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 SMAD6O43541 496 aaKnown RBP13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 CLDN11O75508 207 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 ENDOD1O94919 500 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 RHOCP08134 193 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 KRT5P13647 590 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 RABIFP47224 123 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 RPIAP49247 311 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 NEK3P51956 506 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 PDX1P52945 283 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 TPRG1LQ5T0D9 272 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 KIAA1161Q6NSJ0 714 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 LINGO4Q6UY18 593 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 ATG14Q6ZNE5 492 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 USP53Q70EK8 1073 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 C14orf80Q86SX3 495 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 LURAP1LQ8IV03 231 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 ARHGEF19Q8IW93 802 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 DEFB106AQ8N104 65 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 EXTL1Q92935 676 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 PPP1R16AQ96I34 528 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 GOLPH3LQ9H4A5 285 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 METTL14Q9HCE5 456 aaKnown RBP13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 VPS51Q9UID3 782 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 HS3ST4Q9Y661 456 aa13.29□□□□□ -0.28
CLNS1A-207ENST00000527133 AHCTF1Q8WYP5 2266 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 TRIM49BA6NDI0 452 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 TPP1O14773 563 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 SPINT1O43278 529 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 PAGE1O75459 146 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 LEFTY1O75610 366 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 CNTN5O94779 1100 aa13.28□□□□□ -0.28
CLNS1A-207ENST00000527133 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms