RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 CASKIN1Q8WXD9 1431 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 FYCO1Q9BQS8 1478 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 LINC00854A0A1B0GVQ3 168 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 POC1B-GALNT4F8VUJ3 575 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 M0QX08 132 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 FCHO1O14526 889 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ASNA1O43681 348 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 PLOD3O60568 738 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 EXOC3O60645 756 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 STAM2O75886 525 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 DDHD2O94830 711 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 LARGE1O95461 756 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 VNN1O95497 513 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 APOA4P06727 396 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ITGA5P08648 1049 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 VIMP08670 466 aaKnown RBP3.37□□□□□ -1.87
COPB1-205ENST00000526527 THEGLP0DJG4 465 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ARP10275 920 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 CD9P21926 228 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 IL6STP40189 918 aaPredicted RBP3.37□□□□□ -1.87
COPB1-205ENST00000526527 RAD52P43351 418 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 HSD17B7P56937 341 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 HOXA4Q00056 320 aaPredicted RBP3.37□□□□□ -1.87
COPB1-205ENST00000526527 SP2Q02086 613 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 FOXO1Q12778 655 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 SEMA3BQ13214 749 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 PTK2BQ14289 1009 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 PPP1R7Q15435 360 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 INAQ16352 499 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 PFKFB4Q16877 469 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 Q4G0T1 1027 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ZNF569Q5MCW4 686 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 PXDC1Q5TGL8 231 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 RAP1GAP2Q684P5 730 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 RINT1Q6NUQ1 792 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 FAM180BQ6P0A1 224 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 CCBE1Q6UXH8 406 aaPredicted RBP3.37□□□□□ -1.87
COPB1-205ENST00000526527 UNC5DQ6UXZ4 953 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 GALNT4Q8N4A0 578 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ATG16L2Q8NAA4 619 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ADPRHL1Q8NDY3 354 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 TNIP2Q8NFZ5 429 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 RUBCNQ92622 972 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 HVCN1Q96D96 273 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 EID2BQ96D98 161 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 CCDC17Q96LX7 622 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 MMS19Q96T76 1030 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 TMEM79Q9BSE2 394 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 KATNAL1Q9BW62 490 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 TRIM2Q9C040 744 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 VCX3BQ9H321 246 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 VPS37BQ9H9H4 285 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 USP29Q9HBJ7 922 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 SEPSECSQ9HD40 501 aaKnown RBP3.37□□□□□ -1.87
COPB1-205ENST00000526527 OBP2BQ9NPH6 170 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 RXFP3Q9NSD7 469 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 TCP11L1Q9NUJ3 509 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 HPF1Q9NWY4 346 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 ZNF112Q9UJU3 913 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 MTF2Q9Y483 593 aaPredicted RBP3.37□□□□□ -1.87
COPB1-205ENST00000526527 PCDHB7Q9Y5E2 793 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 GPRASP1Q5JY77 1395 aa3.37□□□□□ -1.87
COPB1-205ENST00000526527 CFAP43Q8NDM7 1665 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 VPS8Q8N3P4 1428 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.36□□□□□ -1.87
COPB1-205ENST00000526527 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 CCDC69A6NI79 296 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 C3orf70A6NLC5 250 aaPredicted RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 LGALS16A8MUM7 142 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 TMEM232C9JQI7 657 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 F8VZ95 297 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 KIF2AO00139 706 aaPredicted RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 ACKR2O00590 384 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 NPC1O15118 1278 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 CEP104O60308 925 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 PIP5K1CO60331 668 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 KINO60870 393 aaKnown RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 DIAPH2O60879 1101 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 BCAR3O75815 825 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 ACTL6BO94805 426 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 NTSR2O95665 410 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 HSPA1AP0DMV8 641 aaKnown RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 HSPA1BP0DMV9 641 aaKnown RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 SFTPCP11686 197 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 P4HA1P13674 534 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 HSD3B1P14060 373 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 PDIA3P30101 505 aaKnown RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 SLC8A1P32418 973 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 CHKAP35790 457 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 SERPINF1P36955 418 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 IGHMBP2P38935 993 aaKnown RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 PLCD1P51178 756 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 JAK3P52333 1124 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 LINC00205P59089 165 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 LMAN2Q12907 356 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 KCNB1Q14721 858 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 RPS6KA2Q15349 733 aa3.36□□□□□ -1.87
COPB1-205ENST00000526527 TRIP6Q15654 476 aaKnown RBP3.36□□□□□ -1.87
COPB1-205ENST00000526527 IMMTQ16891 758 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms