RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 MYBPC2Q14324 1141 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 ZNF449Q6P9G9 518 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 GATAD2AQ86YP4 633 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 RBFAQ8N0V3 343 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 ZNF114Q8NC26 417 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 OR1N1Q8NGS0 311 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 C2CD4CQ8TF44 421 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 KIAA1191Q96A73 305 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.31□□□□□ -1.729e-6■■□□□ 13.2
CSDE1-210ENST00000525878 CERS4Q9HA82 394 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 A0A0U1RQJ8 604 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 MMP3P08254 477 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 C21orf33P30042 268 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-210ENST00000525878 PCP4P48539 62 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 CTTNQ14247 550 aaKnown RBP4.3□□□□□ -1.72
CSDE1-210ENST00000525878 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.72
CSDE1-210ENST00000525878 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 PALB2Q86YC2 1186 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 ADGRG7Q96K78 797 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 SLC25A13Q9UJS0 675 aa4.3□□□□□ -1.72
CSDE1-210ENST00000525878 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 EYA2O00167 538 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 ITM2AO43736 263 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 GLIPR1P48060 266 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 ADORA2A-AS1P86434 159 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 SNTA1Q13424 505 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 ALKBH1Q13686 389 aaKnown RBP4.29□□□□□ -1.72
CSDE1-210ENST00000525878 LONRF1Q17RB8 773 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 TBC1D9BQ66K14 1250 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 PATL1Q86TB9 770 aaKnown RBP4.29□□□□□ -1.72
CSDE1-210ENST00000525878 WDR5BQ86VZ2 330 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 SCN4BQ8IWT1 228 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 WBP2Q969T9 261 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 MUL1Q969V5 352 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 TRIM31Q9BZY9 425 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 KLHL42Q9P2K6 505 aa4.29□□□□□ -1.72
CSDE1-210ENST00000525878 AQP12BA6NM10 295 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 EFCAB8A8MWE9 144 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 TULP2O00295 520 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 GSTM2P28161 218 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 ARL16Q0P5N6 197 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 NAGSQ8N159 534 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 VPS52Q8N1B4 723 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 FAM71BQ8TC56 605 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 CCDC138Q96M89 665 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 IL17FQ96PD4 163 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 FNIP2Q9P278 1114 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 RCE1Q9Y256 329 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 WDR81Q562E7 1941 aa4.28□□□□□ -1.72
CSDE1-210ENST00000525878 A0A1B0GVM2 712 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 MAGEA13PA6NCF6 341 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 DDTLA6NHG4 134 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-210ENST00000525878 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 ACSM2AQ08AH3 577 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 DLG1Q12959 904 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 MYBPHQ13203 477 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 DCTN1Q14203 1278 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 AADACL2Q6P093 401 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 DCUN1D3Q8IWE4 304 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 SPATA20Q8TB22 786 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 STYXQ8WUJ0 223 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 EID2BQ96D98 161 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 BICD1Q96G01 975 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 TEFMQ96QE5 360 aaKnown RBP4.27□□□□□ -1.73
CSDE1-210ENST00000525878 MSTO1Q9BUK6 570 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 IFT27Q9BW83 186 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 CADM1Q9BY67 442 aaKnown RBP4.27□□□□□ -1.73
CSDE1-210ENST00000525878 ABHD16BQ9H3Z7 469 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 CLK4Q9HAZ1 481 aaKnown RBP4.27□□□□□ -1.73
CSDE1-210ENST00000525878 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 ADAM18Q9Y3Q7 739 aa4.27□□□□□ -1.73
CSDE1-210ENST00000525878 DYTNA2CJ06 578 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 PRAC2D3DTV9 90 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 PAK4O96013 591 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-210ENST00000525878 CYP21A2P08686 494 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 RFC1P35251 1148 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-210ENST00000525878 AK2P54819 239 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 PTK2BQ14289 1009 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 SPARCL1Q14515 664 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-210ENST00000525878 TTC22Q5TAA0 569 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 TMEM268Q5VZI3 342 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 NFRKBQ6P4R8 1299 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 GALNT7Q86SF2 657 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 EXOC3L1Q86VI1 746 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 TMC8Q8IU68 726 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 POC1AQ8NBT0 407 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 GPT2Q8TD30 523 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 TAF15Q92804 592 aaKnown RBP eCLIP4.26□□□□□ -1.73
CSDE1-210ENST00000525878 ARRDC3Q96B67 414 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 TXNDC15Q96J42 360 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 SGCZQ96LD1 299 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 C8orf48Q96LL4 319 aa4.26□□□□□ -1.73
CSDE1-210ENST00000525878 SAA2-SAA4A0A096LPE2 208 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 GOLGA6L3A6NEY3 463 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 C17orf100A8MU93 164 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms