RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CLEC14AQ86T13 490 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 PARGQ86W56 976 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SLC35F3Q8IY50 421 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 TMEM174Q8WUU8 243 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 KAT5Q92993 513 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 BTN2A3PQ96KV6 586 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 FEM1AQ9BSK4 669 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SLC17A9Q9BYT1 436 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SIK2Q9H0K1 926 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 SLC12A6Q9UHW9 1150 aa11.91□□□□□ -0.5
SDCBP-211ENST00000523441 TLN1Q9Y490 2541 aaKnown RBP11.91□□□□□ -0.5
SDCBP-211ENST00000523441 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 EME2A4GXA9 379 aaPredicted RBP11.9□□□□□ -0.5
SDCBP-211ENST00000523441 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 KCNU1A8MYU2 1149 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 ALOX15BO15296 676 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 SPINT1O43278 529 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 SMAD6O43541 496 aaKnown RBP11.9□□□□□ -0.5
SDCBP-211ENST00000523441 NOBOXO60393 691 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 PPFIA2O75334 1257 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 GCATO75600 419 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.5
SDCBP-211ENST00000523441 ANXA6P08133 673 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 CELA2BP08218 269 aaPredicted RBP11.9□□□□□ -0.5
SDCBP-211ENST00000523441 PFKFB1P16118 471 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 ITIH1P19827 911 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 RPIAP49247 311 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 MAPK10P53779 464 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 FGL2Q14314 439 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 TAF5Q15542 800 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 FBXL22Q6P050 247 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.5
SDCBP-211ENST00000523441 ZFAND4Q86XD8 727 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 SCML4Q8N228 414 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 PPM1KQ8N3J5 372 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 ZSCAN1Q8NBB4 408 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 TPCN2Q8NHX9 752 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 GLMNQ92990 594 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 APOBEC3BQ9UH17 382 aaKnown RBP11.9□□□□□ -0.5
SDCBP-211ENST00000523441 IL36AQ9UHA7 158 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 PADI4Q9UM07 663 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 SCN8AQ9UQD0 1980 aa11.9□□□□□ -0.5
SDCBP-211ENST00000523441 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 NEMP1O14524 444 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 FPGTO14772 594 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CETN3O15182 167 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 LEFTY1O75610 366 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 TCEA3O75764 348 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 GRAP2O75791 330 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 ADCY5O95622 1261 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 GP1BBP13224 206 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 NOS2P35228 1153 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 RECQLP46063 649 aaPredicted RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 THOP1P52888 689 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CCL7P80098 99 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 EIF2B5Q13144 721 aaKnown RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 NME3Q13232 169 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 SGCGQ13326 291 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CNGA2Q16280 664 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 C4orf17Q53FE4 359 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 FAXCQ5TGI0 409 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 DENND1BQ6P3S1 775 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 KYAT3Q6YP21 454 aaKnown RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 RRAGAQ7L523 313 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 SDR16C5Q8N3Y7 309 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 RYBPQ8N488 228 aaPredicted RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 OR2A12Q8NGT7 310 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CCDC74AQ96AQ1 378 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 ALG14Q96F25 216 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 GFM1Q96RP9 751 aaKnown RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 CPEB1Q9BZB8 566 aaKnown RBP11.89□□□□□ -0.51
SDCBP-211ENST00000523441 STRADBQ9C0K7 418 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 DDIT4Q9NX09 232 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 SPASTQ9UBP0 616 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 RABGEF1Q9UJ41 708 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 SALL4Q9UJQ4 1053 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 KIAA1257Q9ULG3 409 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 ITM2BQ9Y287 266 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 SNX10Q9Y5X0 201 aa11.89□□□□□ -0.51
SDCBP-211ENST00000523441 PRAMEF33A0A0G2JMD5 474 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 FAM170AA1A519 330 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 E5RJQ4 531 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 PRAMEF10O60809 474 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 PRNPP04156 253 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 RPLP0P05388 317 aaKnown RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 RHOCP08134 193 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 PAEPP09466 180 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 WT1P19544 449 aaPredicted RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms