RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CDC14AQ9UNH5 594 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 SCN7AQ01118 1682 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 SPDYE2BA6NHP3 402 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 CNOT3O75175 753 aaKnown RBP9.16□□□□□ -0.94
CSMD1-212ENST00000523387 TOMM70O94826 608 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 SPDYE6P0CI01 402 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 STAG3L1P0CL83 205 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 TRPC1P48995 793 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 ZNF132P52740 706 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 NDST2P52849 883 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 ITGA7Q13683 1181 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 NAPEPLDQ6IQ20 393 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 CENPSQ8N2Z9 138 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 ZCCHC7Q8N3Z6 543 aaKnown RBP9.16□□□□□ -0.94
CSMD1-212ENST00000523387 ASB9Q96DX5 294 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 DACH2Q96NX9 599 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 B3GNT5Q9BYG0 378 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 HIPK3Q9H422 1215 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 HSFX1Q9UBD0 423 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 HMGXB4Q9UGU5 601 aa9.16□□□□□ -0.94
CSMD1-212ENST00000523387 LACTBL1A8MY62 500 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 HACD1B0YJ81 288 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 H3BNH8 94 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 FBP2O00757 339 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 AP1G1O43747 822 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 KRT75O95678 551 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 GNL1P36915 607 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 CLCN3P51790 818 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 RAD23AP54725 363 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 HMGCS2P54868 508 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 DMPKQ09013 629 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ZNF423Q2M1K9 1284 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ZNF829Q3KNS6 432 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 RSPH1Q8WYR4 309 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 HPS1Q92902 700 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 TUBGCP3Q96CW5 907 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 MFSD3Q96ES6 412 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 MCRS1Q96EZ8 462 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 CSPG4P5Q96PW8 444 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 CYTH4Q9UIA0 394 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 KIAA1257Q9ULG3 409 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 PCDHGB4Q9UN71 923 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 PCDHGB5Q9Y5G0 923 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 COPG1Q9Y678 874 aaKnown RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 DDX60LQ5H9U9 1706 aaKnown RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 TBC1D4O60343 1298 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 FBXO21O94952 628 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 LDLRP01130 860 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 NR4A1P22736 598 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 TCF7P36402 384 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 HALP42357 657 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ASPAP45381 313 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 CD97P48960 835 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 CSE1LP55060 971 aaKnown RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 TMEM62Q0P6H9 643 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 SEMA5AQ13591 1074 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 SQLEQ14534 574 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 POU6F1Q14863 301 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ARL13BQ3SXY8 428 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 SPPL2CQ8IUH8 684 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 NIM1KQ8IY84 436 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 PPHLN1Q8NEY8 458 aaKnown RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 OR2T34Q8NGX1 318 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 OR2T3Q8NH03 318 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 BIRC8Q96P09 236 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 QKIQ96PU8 341 aaKnown RBP eCLIP9.15□□□□□ -0.947e-33■■■■■ 356
CSMD1-212ENST00000523387 TWNKQ96RR1 684 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 MRIQ9BWK5 157 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 TEX13BQ9BXU2 312 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 RIMS3Q9UJD0 308 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 CNOT6Q9ULM6 557 aaKnown RBP9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ZNF232Q9UNY5 417 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ANKRD6Q9Y2G4 727 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 ITGB4P16144 1822 aa9.15□□□□□ -0.94
CSMD1-212ENST00000523387 M0QYT0 321 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 LSM1O15116 133 aaKnown RBP9.15□□□□□ -0.95
CSMD1-212ENST00000523387 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-212ENST00000523387 NRP2O60462 931 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 MAN1A2O60476 641 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 CLIC3O95833 236 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 JCHAINP01591 159 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 FCGR1AP12314 374 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 TSPAN8P19075 237 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 FUT4P22083 530 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 ADSLP30566 484 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-212ENST00000523387 SLC7A1P30825 629 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 HADHAP40939 763 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 ATXN1P54253 815 aaKnown RBP9.15□□□□□ -0.95
CSMD1-212ENST00000523387 TUBA4AP68366 448 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 NFYCQ13952 458 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 SPIDRQ14159 915 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 PIGGQ5H8A4 983 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 CERCAMQ5T4B2 595 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 EEF1DP3Q658K8 133 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 BORAQ6PGQ7 559 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 KCTD8Q6ZWB6 473 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 PQLC3Q8N755 202 aa9.15□□□□□ -0.95
CSMD1-212ENST00000523387 ZNF555Q8NEP9 628 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms