RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 BCCIPQ9P287 314 aaKnown RBP eCLIP12.17□□□□□ -0.46
PVT1-215ENST00000522963 IPO11Q9UI26 975 aaKnown RBP12.17□□□□□ -0.46
PVT1-215ENST00000522963 VPS51Q9UID3 782 aa12.17□□□□□ -0.46
PVT1-215ENST00000522963 DNPEPQ9ULA0 475 aa12.17□□□□□ -0.46
PVT1-215ENST00000522963 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
PVT1-215ENST00000522963 FANCMQ8IYD8 2048 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 WASH3PC4AMC7 463 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 H7C0C1 242 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 CBX4O00257 560 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PPP1R12AO14974 1030 aaPredicted RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 MCF2LO15068 1137 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PRAMEF11O60813 436 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 RBP3P10745 1247 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 TDGF1P13385 188 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 HOXB2P14652 356 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 VAV1P15498 845 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PLA2G5P39877 138 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 CTSOP43234 321 aaPredicted RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 ATP5OP48047 213 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 DGKEP52429 567 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 ARF5P84085 180 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PPIDQ08752 370 aaKnown RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 SRSF5Q13243 272 aaKnown RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 XRCC4Q13426 336 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 SNX1Q13596 522 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PRKD1Q15139 912 aaPredicted RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 CCNG2Q16589 344 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 CYP1B1Q16678 543 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 ANO7Q6IWH7 933 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 LEKR1Q6ZMV7 388 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PRR23BQ6ZRT6 265 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 LRRC49Q8IUZ0 686 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 CCNYQ8ND76 341 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 CYB5D2Q8WUJ1 264 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 HMGB4Q8WW32 186 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 NKD2Q969F2 451 aaPredicted RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 TTC17Q96AE7 1141 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 TSGA13Q96PP4 275 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.469e-7■■■□□ 15
PVT1-215ENST00000522963 FRMD8P1Q9BZ68 369 aaPredicted RBP12.16□□□□□ -0.46
PVT1-215ENST00000522963 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 BRD8Q9H0E9 1235 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 PDFQ9HBH1 243 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 ELOVL2Q9NXB9 296 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 HCN2Q9UL51 889 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
PVT1-215ENST00000522963 TCRBV21S2A2A0A5A6 115 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 HACD1B0YJ81 288 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 AXIN1O15169 862 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 ADAM23O75077 832 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 PAPSS2O95340 614 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 APBB3O95704 486 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 CD160O95971 181 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 PEX11BO96011 259 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 HNRNPLP14866 589 aaKnown RBP eCLIP12.15□□□□□ -0.466e-25■■■□□ 16
PVT1-215ENST00000522963 POLR2EP19388 210 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 CCNCP24863 283 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 RBL1P28749 1068 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 NTSR1P30989 418 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 KCNJ1P48048 391 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 CKAP4Q07065 602 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 IL10RBQ08334 325 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 AP1B1Q10567 949 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 OASLQ15646 514 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 CRY1Q16526 586 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 LPAL2Q16609 132 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 HSF5Q4G112 596 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 SLC45A4Q5BKX6 768 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 FAM182AQ5T1J6 154 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 TTC27Q6P3X3 843 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 DRICH1Q6PGQ1 229 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 DARS2Q6PI48 645 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 LINGO4Q6UY18 593 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 CEP68Q76N32 757 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 ZNF572Q7Z3I7 529 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 ALYREFQ86V81 257 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 LONP2Q86WA8 852 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 CDKL3Q8IVW4 592 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 MAGOHBQ96A72 148 aaKnown RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 C2orf49Q9BVC5 232 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 FAM126AQ9BYI3 521 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 SP110Q9HB58 689 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 POLMQ9NP87 494 aaPredicted RBP12.15□□□□□ -0.46
PVT1-215ENST00000522963 HOMER3Q9NSC5 361 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 HPCAL4Q9UM19 191 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 INVSQ9Y283 1065 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
PVT1-215ENST00000522963 DOCK4Q8N1I0 1966 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 GOLGA6L10A0A0M3HER8 536 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 BCLAF3A2AJT9 711 aaKnown RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 KCNK1O00180 336 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 MATN3O15232 486 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms