RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 CNOT6Q9ULM6 557 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RAP2CQ9Y3L5 183 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ZNF646O15015 1829 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 HEATR9A2RTY3 570 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 TRIM64BA6NI03 449 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 APOL1O14791 398 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SCAMP3O14828 347 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 HMGCRP04035 888 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 TFE3P19532 575 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 GARSP41250 739 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 GRM5P41594 1212 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 YWHAEP62258 255 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 DMPKQ09013 629 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 PDK2Q15119 407 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SLC27A3Q5K4L6 730 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 DENND1BQ6P3S1 775 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CHURC1Q8WUH1 139 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 DCPSQ96C86 337 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 TCF12Q99081 682 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 GATA5Q9BWX5 397 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ZFYVE28Q9HCC9 887 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ASNSD1Q9NWL6 643 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 PIH1D1Q9NWS0 290 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 MAP3K20Q9NYL2 800 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 PCDHGA7Q9Y5G6 932 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 BCLAF3A2AJT9 711 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 KCNU1A8MYU2 1149 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 G3V2L1 256 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 APBA3O96018 575 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 LTFP02788 710 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 BMP2P12643 396 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CAP2P40123 477 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 HSD17B4P51659 736 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CDO1Q16878 200 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ZBTB41Q5SVQ8 909 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 LDLRAP1Q5SW96 308 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SH3PXD2AQ5TCZ1 1133 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 BSPRYQ5W0U4 402 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SCARA5Q6ZMJ2 495 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CHST15Q7LFX5 561 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ANKFN1Q8N957 763 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ZBTB45Q96K62 511 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 ALPK1Q96QP1 1244 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CPXM1Q96SM3 734 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 UHRF1Q96T88 793 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CGRRF1Q99675 332 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 HERC2P3Q9BVR0 1158 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 MROQ9BYG7 248 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 UNC93B1Q9H1C4 597 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 UPF3AQ9H1J1 476 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SIAEQ9HAT2 523 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 SPC25Q9HBM1 224 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 VTA1Q9NP79 307 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 CYTH4Q9UIA0 394 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 COPG1Q9Y678 874 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 PCNTO95613 3336 aa9.75□□□□□ -0.85
CTNNA1-230ENST00000521724 TCRBV3S1A0A5B6 114 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 PRORSD1PA6NEY8 169 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 TRIM64A6NGJ6 449 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ZNF839A8K0R7 811 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 F5H423 210 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 PRPSAP2O60256 369 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 H2AFYO75367 372 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ENDOD1O94919 500 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 KCNH1O95259 989 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 PIGNO95427 931 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 MYCLP12524 364 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 TPSB2P20231 275 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 TCEA1P23193 301 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 EPHX2P34913 555 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 CCR10P46092 362 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 SESN2P58004 480 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ARPC4P59998 168 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 SF3B4Q15427 424 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■■■■■ 27.7
CTNNA1-230ENST00000521724 TPSAB1Q15661 275 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ARL13AQ5H913 290 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 GLRA4Q5JXX5 417 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 LRRC8EQ6NSJ5 796 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ABRAXAS1Q6UWZ7 409 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 MFSD2AQ8NA29 543 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 CANT1Q8WVQ1 401 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 CTRCQ99895 268 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 DHX35Q9H5Z1 703 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ZNF385DQ9H6B1 395 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 PARVBQ9HBI1 364 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 RAVER2Q9HCJ3 691 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 UTP6Q9NYH9 597 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 POU2F3Q9UKI9 436 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 ST14Q9Y5Y6 855 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 UBIAD1Q9Y5Z9 338 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 CNTNAP1P78357 1384 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 CLOCKO15516 846 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 GCATO75600 419 aa9.74□□□□□ -0.85
CTNNA1-230ENST00000521724 RAD17O75943 681 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms