RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ZDHHC7Q9NXF8 308 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 TBC1D14Q9P2M4 693 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 GJD2Q9UKL4 321 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 TBX20Q9UMR3 447 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 PCDHA12Q9UN75 941 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 SETD1BQ9UPS6 1966 aaKnown RBP5.51□□□□□ -1.53
SKP1-208ENST00000521216 IGLV5-39A0A0G2JS06 123 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 A6NLC8 198 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CEP104O60308 925 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 MOSPD3O75425 235 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CHRM4P08173 479 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 TNFSF8P32971 234 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 RFC1P35251 1148 aaPredicted RBP5.51□□□□□ -1.53
SKP1-208ENST00000521216 GGT5P36269 586 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 DPP6P42658 865 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CDH15P55291 814 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 GALNT2Q10471 571 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 PRTGQ2VWP7 1150 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 ZNF425Q6IV72 752 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CCDC70Q6NSX1 233 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 TRAPPC11Q7Z392 1133 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CHD1LQ86WJ1 897 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CAMK1DQ8IU85 385 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 HORMAD2Q8N7B1 307 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 RAB40AQ8WXH6 277 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 SMG7Q92540 1137 aaKnown RBP5.51□□□□□ -1.53
SKP1-208ENST00000521216 ATOH1Q92858 354 aaPredicted RBP5.51□□□□□ -1.53
SKP1-208ENST00000521216 APOPT1Q96IL0 206 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 CLSTN3Q9BQT9 956 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 INTS2Q9H0H0 1204 aaKnown RBP5.51□□□□□ -1.53
SKP1-208ENST00000521216 TASP1Q9H6P5 420 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 FZD3Q9NPG1 666 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 ENTPD7Q9NQZ7 604 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 RNF146Q9NTX7 359 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 GRHL1Q9NZI5 618 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 IL1RAPL1Q9NZN1 696 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 SLC4A4Q9Y6R1 1079 aa5.51□□□□□ -1.53
SKP1-208ENST00000521216 MST1RQ04912 1400 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 CCDC196A0A1B0GTZ2 297 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 RNMTO43148 476 aaKnown RBP5.5□□□□□ -1.53
SKP1-208ENST00000521216 SLC25A17O43808 307 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 ATG13O75143 517 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 ADAP00813 363 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 SERPINC1P01008 464 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 UNGP13051 313 aaPredicted RBP5.5□□□□□ -1.53
SKP1-208ENST00000521216 PPATQ06203 517 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 G3BP1Q13283 466 aaKnown RBP eCLIP5.5□□□□□ -1.53
SKP1-208ENST00000521216 PTGR1Q14914 329 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 ME3Q16798 604 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 EDRF1Q3B7T1 1238 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 IL20RBQ6UXL0 311 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 PIM3Q86V86 326 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 MON1AQ86VX9 555 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 TCP11L2Q8N4U5 519 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 RASSF8Q8NHQ8 419 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 NOC3LQ8WTT2 800 aaKnown RBP5.5□□□□□ -1.53
SKP1-208ENST00000521216 HDAC7Q8WUI4 952 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 ELP4Q96EB1 424 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 RNF125Q96EQ8 232 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 RRP36Q96EU6 259 aaKnown RBP5.5□□□□□ -1.53
SKP1-208ENST00000521216 SEC62Q99442 399 aaKnown RBP5.5□□□□□ -1.53
SKP1-208ENST00000521216 B3GNT4Q9C0J1 378 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 MAP6D1Q9H9H5 199 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 ATP8A2Q9NTI2 1148 aa5.5□□□□□ -1.53
SKP1-208ENST00000521216 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 LY6G6EA0A0G2JKS1 128 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.49□□□□□ -1.53
SKP1-208ENST00000521216 H3BNX3 289 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 STMND1H3BQB6 276 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 TNPO2O14787 897 aaKnown RBP5.49□□□□□ -1.53
SKP1-208ENST00000521216 KIF1CO43896 1103 aaKnown RBP5.49□□□□□ -1.53
SKP1-208ENST00000521216 EPN2O95208 641 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 PSG1P11464 419 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 YWHAQP27348 245 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 PTGER1P34995 402 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 LIFRP42702 1097 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 PAFAH1B1P43034 410 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 GPD2P43304 727 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 NR4A2P43354 598 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 ARSFP54793 590 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 SLC9C2Q5TAH2 1124 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 ASPHD1Q5U4P2 390 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 JAKMIP3Q5VZ66 844 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 SLC16A12Q6ZSM3 486 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 TRIM74Q86UV6 250 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 TRIM73Q86UV7 250 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 CPXM2Q8N436 756 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 ZNF366Q8N895 744 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 TNIP2Q8NFZ5 429 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 CEP76Q8TAP6 659 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 GDPD5Q8WTR4 605 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 ST8SIA4Q92187 359 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 KIF1BPQ96EK5 621 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 HMCESQ96FZ2 354 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 MPHOSPH8Q99549 860 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 C1QTNF7Q9BXJ2 289 aa5.49□□□□□ -1.53
SKP1-208ENST00000521216 POLDIP3Q9BY77 421 aaKnown RBP5.49□□□□□ -1.53
SKP1-208ENST00000521216 LHPPQ9H008 270 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms