RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 BRD8Q9H0E9 1235 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 RBM22Q9NW64 420 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■■■□ 23.6
SREK1-209ENST00000520953 UBP1Q9NZI7 540 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 VPS28Q9UK41 221 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
SREK1-209ENST00000520953 NUMBLQ9Y6R0 609 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 C2CD4DB7Z1M9 353 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 GOLGA8KD6RF30 607 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 MBTPS2O43462 519 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 ZMPSTE24O75844 475 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 DRG2P55039 364 aaKnown RBP15.34■□□□□ 0.05
SREK1-209ENST00000520953 OXCT1P55809 520 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 IFI35P80217 286 aaPredicted RBP15.34■□□□□ 0.05
SREK1-209ENST00000520953 TTMPQ5BVD1 217 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 RNF135Q8IUD6 432 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 MFSD6LQ8IWD5 586 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 SFTPA1Q8IWL2 248 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 FIBINQ8TAL6 211 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 TEKT5Q96M29 485 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 IL12RB2Q99665 862 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 PRDM6Q9NQX0 595 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 WHRNQ9P202 907 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 PAK5Q9P286 719 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 VPS51Q9UID3 782 aa15.34■□□□□ 0.05
SREK1-209ENST00000520953 TPX2Q9ULW0 747 aaKnown RBP15.34■□□□□ 0.05
SREK1-209ENST00000520953 ANTXRLA6NF34 631 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 K7ERQ8 282 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 KDELR3O43731 214 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 BANF1O75531 89 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 ADH5P11766 374 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 GRIA1P42261 906 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 SLC6A11P48066 632 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 IL10RBQ08334 325 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 FCHO2Q0JRZ9 810 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 SPARCL1Q14515 664 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 FUT11Q495W5 492 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 HIBCHQ6NVY1 386 aaPredicted RBP15.33■□□□□ 0.04
SREK1-209ENST00000520953 GOLGA6L1Q8N7Z2 621 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 SPATA22Q8NHS9 363 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 PRCCQ92733 491 aaPredicted RBP15.33■□□□□ 0.04
SREK1-209ENST00000520953 CHFRQ96EP1 664 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 EXOC2Q96KP1 924 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 NT5MQ9NPB1 228 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 PIH1D1Q9NWS0 290 aaKnown RBP15.33■□□□□ 0.04
SREK1-209ENST00000520953 DONSONQ9NYP3 566 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 MARK1Q9P0L2 795 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 ANAPC5Q9UJX4 755 aa15.33■□□□□ 0.04
SREK1-209ENST00000520953 SLC9A3R1O14745 358 aaPredicted RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 GDI1P31150 447 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 HSD17B3P37058 310 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 RGRP47804 291 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 UAP1Q16222 522 aaPredicted RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 TMEM215Q68D42 235 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 NAT8LQ8N9F0 302 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 ELSPBP1Q96BH3 223 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 OTUB2Q96DC9 234 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 NSMCE3Q96MG7 304 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 MLPHQ9BV36 600 aaPredicted RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 OPHN1O60890 802 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 APRTP07741 180 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 BMP1P13497 986 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 PSMC3P17980 439 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 ITIH2P19823 946 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 ACTN2P35609 894 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 STK19P49842 368 aaPredicted RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 TFF2Q03403 129 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 HTR4Q13639 388 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 KCNJ11Q14654 390 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 LBRQ14739 615 aaKnown RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 GEN1Q17RS7 908 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 PLEKHG6Q3KR16 790 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 TIGD7Q6NT04 549 aaPredicted RBP15.32■□□□□ 0.04
SREK1-209ENST00000520953 SORCS1Q8WY21 1168 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 LRRC45Q96CN5 670 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 NECTIN4Q96NY8 510 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 RETREG1Q9H6L5 497 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 ECT2Q9H8V3 914 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 OBP2AQ9NY56 170 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 RSPH14Q9UHP6 348 aa15.32■□□□□ 0.04
SREK1-209ENST00000520953 SMAD6O43541 496 aaKnown RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 USP12O75317 370 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 AVILO75366 819 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 STK10O94804 968 aaKnown RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 MT-CYBP00156 380 aaPredicted RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 ZNF33AQ06730 810 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 NIPAL4Q0D2K0 466 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 SMAD4Q13485 552 aaKnown RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 PITRM1Q5JRX3 1037 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 HP1BP3Q5SSJ5 553 aaPredicted RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 MARC1Q5VT66 337 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 PDCD7Q8N8D1 485 aaKnown RBP15.31■□□□□ 0.04
SREK1-209ENST00000520953 FAM76AQ8TAV0 307 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 CCHCR1Q8TD31 782 aa15.31■□□□□ 0.04
SREK1-209ENST00000520953 RPL10LQ96L21 214 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms