RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SCD5Q86SK9 330 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ARHGAP18Q8N392 663 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 NT5C3BQ969T7 300 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 EBF4Q9BQW3 602 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 CCDC68Q9H2F9 335 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 SARS2Q9NP81 518 aaKnown RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 MOCS1Q9NZB8 636 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 SLC2A6Q9UGQ3 507 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ACOT9Q9Y305 439 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 SF3B1O75533 1304 aaKnown RBP eCLIP11.54□□□□□ -0.565e-7■■■■■ 98.4
CLK4-206ENST00000520878 HHLA1C9JL84 531 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 FGF10O15520 208 aaPredicted RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 ENTPD5O75356 428 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SPATA31D3P0C874 917 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 CYP2C18P33260 490 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SLC18A1P54219 525 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 MGAT3Q09327 533 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 ALFQ53S48 1182 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PCID2Q5JVF3 399 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SPATA31D4Q6ZUB0 917 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PLD6Q8N2A8 252 aaKnown RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 TTC8Q8TAM2 541 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 MUC3BQ9H195 1237 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PRKAG3Q9UGI9 489 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 PLIN3O60664 434 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 MT-CO1P00395 513 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 STMN1P16949 149 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PTPN4P29074 926 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 KCNQ1P51787 676 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PDCD2Q16342 344 aaPredicted RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 UGP2Q16851 508 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 NEPROQ6NW34 567 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 DENND1CQ8IV53 801 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SEMA3CQ99985 751 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 UXTQ9UBK9 157 aaPredicted RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SERPINE1P05121 402 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 SLC11A1P49279 550 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 MLLT6P55198 1093 aaPredicted RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 RAB41Q5JT25 222 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 MARK2Q7KZI7 788 aaKnown RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 PIWIL2Q8TC59 973 aaKnown RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 PHF21BQ96EK2 531 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 TMEM169Q96HH4 297 aa11.53□□□□□ -0.56
CLK4-206ENST00000520878 RSRC1Q96IZ7 334 aaKnown RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 NOP53Q9NZM5 478 aaKnown RBP11.53□□□□□ -0.56
CLK4-206ENST00000520878 ZBBXA8MT70 800 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 TK2O00142 265 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 ARVCFO00192 962 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 MATN3O15232 486 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 ZMPSTE24O75844 475 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 CCNCP24863 283 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 PDPK2PQ6A1A2 396 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 PM20D1Q6GTS8 502 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 TMCO2Q7Z6W1 182 aaPredicted RBP11.52□□□□□ -0.56
CLK4-206ENST00000520878 KLHDC9Q8NEP7 349 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 ZSCAN18Q8TBC5 510 aaPredicted RBP11.52□□□□□ -0.56
CLK4-206ENST00000520878 MZB1Q8WU39 189 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 TTC1Q99614 292 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 TMEM161AQ9NX61 479 aa11.52□□□□□ -0.56
CLK4-206ENST00000520878 FAM95CA0A1B0GW59 222 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 MOXD2PA6NHM9 499 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 M0QZQ0 153 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 ENPP3O14638 875 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 GPC4O75487 556 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 SKAP2O75563 359 aaPredicted RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 OAS1P00973 400 aaKnown RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 PRKCGP05129 697 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 ALDH1A3P47895 512 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 HCAR3P49019 387 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 CLNS1AP54105 237 aaKnown RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 ATXN3P54252 364 aaPredicted RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 CAP1Q01518 475 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 PLD1Q13393 1074 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 MUM1Q2TAK8 710 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 FBXL22Q6P050 247 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 CCDC117Q8IWD4 279 aaPredicted RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 TEX9Q8N6V9 391 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 RTL3Q8N8U3 475 aaKnown RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 RBBP8Q99708 897 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 TTPALQ9BTX7 342 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 OSBPL2Q9H1P3 480 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 EIF2B3Q9NR50 452 aaKnown RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 GKN1Q9NS71 199 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 OSER1Q9NX31 292 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 AP3B1O00203 1094 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 ANP32DO95626 131 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 HAPLN1P10915 354 aaPredicted RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 ETV4P43268 484 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 SCAPQ12770 1279 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 TWF1Q12792 350 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms