RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 PCDHB1Q9Y5F3 818 aa20.48■□□□□ 0.87
HDAC2-207ENST00000520170 FAM170AA1A519 330 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 I6L893 689 aaPredicted RBP20.47■□□□□ 0.87
HDAC2-207ENST00000520170 TK2O00142 265 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 PIAS2O75928 621 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 PNMA6AP0CW24 399 aaPredicted RBP20.47■□□□□ 0.87
HDAC2-207ENST00000520170 RECQLP46063 649 aaPredicted RBP20.47■□□□□ 0.87
HDAC2-207ENST00000520170 BRMS1LQ5PSV4 323 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 LRRC31Q6UY01 552 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 GCNT7Q6ZNI0 430 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 SETD3Q86TU7 594 aaPredicted RBP20.47■□□□□ 0.87
HDAC2-207ENST00000520170 ERICH1Q86X53 443 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 ZNF683Q8IZ20 524 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 DCAF4L2Q8NA75 395 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 ZNF397Q8NF99 534 aaPredicted RBP20.47■□□□□ 0.87
HDAC2-207ENST00000520170 TMPRSS4Q9NRS4 437 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 DNAJC12Q9UKB3 198 aa20.47■□□□□ 0.87
HDAC2-207ENST00000520170 FOXN3O00409 490 aaPredicted RBP20.46■□□□□ 0.87
HDAC2-207ENST00000520170 OPA1O60313 960 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 C1QL1O75973 258 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 GIMD1P0DJR0 217 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 ALPPL2P10696 532 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 CKMT1AP12532 417 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 OR1E1P30953 314 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 CLCN1P35523 988 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 CLCN6P51797 869 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 DEUP1Q05D60 604 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
HDAC2-207ENST00000520170 BECN1Q14457 450 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 C22orf39Q6P5X5 142 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 DPY19L3Q6ZPD9 716 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 Q6ZSR6 202 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 GPR155Q7Z3F1 870 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 PTAR1Q7Z6K3 402 aaPredicted RBP20.46■□□□□ 0.87
HDAC2-207ENST00000520170 SPACA3Q8IXA5 215 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 SLC22A18ASQ8N1D0 253 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 OR7D4Q8NG98 312 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 NAF1Q96HR8 494 aaKnown RBP20.46■□□□□ 0.87
HDAC2-207ENST00000520170 APOLD1Q96LR9 279 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 TBCBQ99426 244 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 SPON2Q9BUD6 331 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 HDAC8Q9BY41 377 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 OSBPL2Q9H1P3 480 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 PDCL3Q9H2J4 239 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 DNAJC28Q9NX36 388 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 STAP1Q9ULZ2 295 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 ATMQ13315 3056 aa20.46■□□□□ 0.87
HDAC2-207ENST00000520170 DRGXA6NNA5 263 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 SRGAP2O75044 1071 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 LEFTY1O75610 366 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 MPOP05164 745 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 MTIF2P46199 727 aaKnown RBP20.45■□□□□ 0.86
HDAC2-207ENST00000520170 DNA2P51530 1060 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 CXADRP78310 365 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 TLE3Q04726 772 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 ABI3BPQ7Z7G0 1075 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 ZDHHC17Q8IUH5 632 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 PPP1R16AQ96I34 528 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 LGMNQ99538 433 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 SIX2Q9NPC8 291 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 NLGN3Q9NZ94 848 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 PAXBP1Q9Y5B6 917 aa20.45■□□□□ 0.86
HDAC2-207ENST00000520170 GTPBP10A4D1E9 387 aaKnown RBP20.44■□□□□ 0.86
HDAC2-207ENST00000520170 NEMP2A6NFY4 417 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 A6NNZ2 444 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 NEBLO76041 1014 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 F9P00740 461 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 TMEM259Q4ZIN3 620 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 CDCP2Q5VXM1 449 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 IRF2BP1Q8IU81 584 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 NT5C3BQ969T7 300 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 BMFQ96LC9 184 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 C1orf74Q96LT6 269 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 DEPDC7Q96QD5 511 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 SLC17A9Q9BYT1 436 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 ABCG4Q9H172 646 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 WASF2Q9Y6W5 498 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 RP1P56715 2156 aa20.44■□□□□ 0.86
HDAC2-207ENST00000520170 TEX51A0A1B0GUA7 166 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 POM121BA6NF01 834 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 K7ESM1 405 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 SCAMP1O15126 338 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 USP12O75317 370 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 ZNF821O75541 412 aaPredicted RBP20.43■□□□□ 0.86
HDAC2-207ENST00000520170 PAK4O96013 591 aaPredicted RBP20.43■□□□□ 0.86
HDAC2-207ENST00000520170 NEK3P51956 506 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 RPS21P63220 83 aaKnown RBP20.43■□□□□ 0.86
HDAC2-207ENST00000520170 GABREP78334 506 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 SLC25A52Q3SY17 297 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 FAM102AQ5T9C2 384 aaPredicted RBP20.43■□□□□ 0.86
HDAC2-207ENST00000520170 RETSATQ6NUM9 610 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 DCP2Q8IU60 420 aaKnown RBP20.43■□□□□ 0.86
HDAC2-207ENST00000520170 TMEM35BQ8NCS4 154 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 PGAP3Q96FM1 320 aaPredicted RBP20.43■□□□□ 0.86
HDAC2-207ENST00000520170 IFT43Q96FT9 208 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 FEM1CQ96JP0 617 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 HS3ST3A1Q9Y663 406 aa20.43■□□□□ 0.86
HDAC2-207ENST00000520170 KIF26BQ2KJY2 2108 aa20.42■□□□□ 0.86
HDAC2-207ENST00000520170 IGLV3-10A0A075B6K4 115 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms