RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ELOA3Q8NG57 546 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 MYO19Q96H55 970 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 SPAG5Q96R06 1193 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 FUCA2Q9BTY2 467 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 XYLT2Q9H1B5 865 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 OSBPL2Q9H1P3 480 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 PCIF1Q9H4Z3 704 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 NMUR1Q9HB89 426 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 UCKL1Q9NWZ5 548 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 CCDC39Q9UFE4 941 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 HBS1LQ9Y450 684 aaKnown RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 U3KQA8 63 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 NBASA2RRP1 2371 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF106Q9H2Y7 1883 aaKnown RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 PDZD2O15018 2839 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SCO2A0A1W2PP80 73 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 FRMD3A2A2Y4 597 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 A6NNZ2 444 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 C1QTNF3-AMACRE9PGA6 284 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ALOX15BO15296 676 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 EIF3DO15371 548 aaKnown RBP eCLIP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 AQP9O43315 295 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 PHACTR2O75167 634 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 AGFG2O95081 481 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 DDAH2O95865 285 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 JMJD7P0C870 316 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 GIMD1P0DJR0 217 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CCDC130P13994 396 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 HNRNPA2B1P22626 353 aaKnown RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 AKT2P31751 481 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CCKBRP32239 447 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 UGT1A5P35504 534 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 TXLNAP40222 546 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 PSMD8P48556 350 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SLC11A2P49281 568 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 PDX1P52945 283 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 POLE2P56282 527 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 MYL6P60660 151 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 YWHAGP61981 247 aaKnown RBP eCLIP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CYP24A1Q07973 514 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 EHHADHQ08426 723 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CDKN3Q16667 212 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SKIDA1Q1XH10 827 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 FHL5Q5TD97 284 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 NUGGCQ68CJ6 796 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SV2BQ7L1I2 683 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 RAB11FIP2Q7L804 512 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 GPRIN1Q7Z2K8 1008 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 EFL1Q7Z2Z2 1120 aaKnown RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ABI3BPQ7Z7G0 1075 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 PARGQ86W56 976 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 JAMLQ86YT9 394 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CBWD2Q8IUF1 395 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 MFN1Q8IWA4 741 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 UNC45BQ8IWX7 931 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ZC3H3Q8IXZ2 948 aaKnown RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF295-AS1Q8N0V1 137 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 HJURPQ8NCD3 748 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF548Q8NEK5 533 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 OR6C4Q8NGE1 309 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 FIBINQ8TAL6 211 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 GPBAR1Q8TDU6 330 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SSC4DQ8WTU2 575 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 BTN2A2Q8WVV5 523 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 TAF4BQ92750 862 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 AZIN2Q96A70 460 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 MIB2Q96AX9 1013 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ARRDC3Q96B67 414 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CYFIP2Q96F07 1278 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 FAM84AQ96KN4 292 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 TBATAQ96M53 351 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 TMEM74Q96NL1 305 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 IL12RB2Q99665 862 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 DDX50Q9BQ39 737 aaKnown RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 BOCQ9BWV1 1114 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CALN1Q9BXU9 219 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 DUSP16Q9BY84 665 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 UBXN6Q9BZV1 441 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SMYD3Q9H7B4 428 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 DNAJC28Q9NX36 388 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 TBC1D7Q9P0N9 293 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 CGNQ9P2M7 1197 aaKnown RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 NUDT5Q9UKK9 219 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 NOVA2Q9UNW9 492 aaKnown RBP5.04□□□□□ -1.6
SDCBP-207ENST00000520168 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ERVW-1Q9UQF0 538 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 ITPR3Q14573 2671 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 SDK2Q58EX2 2172 aa5.04□□□□□ -1.6
SDCBP-207ENST00000520168 LRP4O75096 1905 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CPED1A4D0V7 1026 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 A6NJY4 79 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 STMND1H3BQB6 276 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NTN3O00634 580 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 VPS4BO75351 444 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CSF2P04141 144 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 RPN1P04843 607 aaKnown RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 IDEP14735 1019 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NME1P15531 152 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms