RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 CHADO15335 359 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 NARSO43776 548 aaKnown RBP17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 CACNG3O60359 315 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 SEC31AO94979 1220 aaKnown RBP17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 ADH1CP00326 375 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 OPRD1P41143 372 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 BASP1P80723 227 aaKnown RBP17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 KDSRQ06136 332 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 NIPAL4Q0D2K0 466 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 SPARCL1Q14515 664 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 CCDC70Q6NSX1 233 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 ARHGEF18Q6ZSZ5 1173 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 MAFAQ8NHW3 353 aaPredicted RBP17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 FBXO25Q8TCJ0 367 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 CYB5D2Q8WUJ1 264 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 E2F7Q96AV8 911 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 RAB17Q9H0T7 212 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 ZDHHC18Q9NUE0 388 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 FCF1Q9Y324 198 aaKnown RBP17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 PRRT4C9JH25 899 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 TMEM63AO94886 807 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 PABPC1P11940 636 aaKnown RBP17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 GRIA1P42261 906 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 LBRQ14739 615 aaKnown RBP17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 RNASEH2BQ5TBB1 312 aaKnown RBP17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 MARC1Q5VT66 337 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 ZNF783Q6ZMS7 281 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 MTSS1LQ765P7 747 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 KIAA0907Q7Z7F0 614 aaPredicted RBP17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 LRRC49Q8IUZ0 686 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 IFT20Q8IY31 132 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 SLC44A3Q8N4M1 653 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 TEX26Q8N6G2 289 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 KIAA1958Q8N8K9 716 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 SNF8Q96H20 258 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 OXNAD1Q96HP4 312 aaPredicted RBP17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 ZDHHC4Q9NPG8 344 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 PAK5Q9P286 719 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 SLCO3A1Q9UIG8 710 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
TSNARE1-205ENST00000520166 DNALI1O14645 258 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 MT-CYBP00156 380 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 MMP13P45452 471 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 DGKGP49619 791 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 PLK1P53350 603 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 DSC2Q02487 901 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 ZNF33AQ06730 810 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 HNRNPDQ14103 355 aaKnown RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 TIGD7Q6NT04 549 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 CCDC117Q8IWD4 279 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 PHTF2Q8N3S3 785 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 ART4Q93070 314 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 BRD9Q9H8M2 597 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 PIH1D1Q9NWS0 290 aaKnown RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 UBA2Q9UBT2 640 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 ANAPC5Q9UJX4 755 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 TPX2Q9ULW0 747 aaKnown RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 ATP8A1Q9Y2Q0 1164 aa17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 FARP1Q9Y4F1 1045 aaPredicted RBP17.31■□□□□ 0.36
TSNARE1-205ENST00000520166 BANF1O75531 89 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 DRG2P55039 364 aaKnown RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 TUBB4BP68371 445 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 ITKQ08881 620 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 HLTFQ14527 1009 aaKnown RBP eCLIP17.3■□□□□ 0.369e-8■■■□□ 16.5
TSNARE1-205ENST00000520166 UBAP2Q5T6F2 1119 aaKnown RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 MBLAC2Q68D91 279 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 HIBCHQ6NVY1 386 aaPredicted RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 DCAF4L2Q8NA75 395 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 RBM15Q96T37 977 aaKnown RBP eCLIP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 MTG2Q9H4K7 406 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 GLOD4Q9HC38 313 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 HPCAL4Q9UM19 191 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 MIA3Q5JRA6 1907 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 OPHN1O60890 802 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 USP12O75317 370 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 AVILO75366 819 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 ZNF821O75541 412 aaPredicted RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 TMCC1O94876 653 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 MMP2P08253 660 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 RENBPP51606 427 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 KCNJ11Q14654 390 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 DGKKQ5KSL6 1271 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 ATXN7L2Q5T6C5 722 aaPredicted RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 TMCO4Q5TGY1 634 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 TXNDC11Q6PKC3 985 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 KDELC2Q7Z4H8 507 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 CPA6Q8N4T0 437 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 PRCCQ92733 491 aaPredicted RBP17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 ZBTB9Q96C00 473 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 WHRNQ9P202 907 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 HCN2Q9UL51 889 aa17.3■□□□□ 0.36
TSNARE1-205ENST00000520166 TICRRQ7Z2Z1 1910 aa17.29■□□□□ 0.36
TSNARE1-205ENST00000520166 MTSS1O43312 755 aa17.29■□□□□ 0.36
TSNARE1-205ENST00000520166 STK10O94804 968 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms