RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 TSC1Q92574 1164 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 KLK6Q92876 244 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 MYOCQ99972 504 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 CALN1Q9BXU9 219 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 HDAC8Q9BY41 377 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 CEP44Q9C0F1 390 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 TNKS2Q9H2K2 1166 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 ATP13A1Q9HD20 1204 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 KLHL11Q9NVR0 708 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 AK5Q9Y6K8 562 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 TP53BP1Q12888 1972 aaPredicted RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 ADAMTS20P59510 1910 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 EIF4E1BA6NMX2 242 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 F8VZ95 297 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 SMAD6O43541 496 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 SDC3O75056 442 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 LEFTY1O75610 366 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 ENDOD1O94919 500 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 CTSLP07711 333 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 MMEP08473 750 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 SDC4P31431 198 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 FLT3P36888 993 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 GEMIN4P57678 1058 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 TAS2R38P59533 333 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 NOMO3P69849 1222 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 ATP11AP98196 1134 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 GNA12Q03113 381 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 TARDBPQ13148 414 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■□ 21.7
PVT1-208ENST00000519481 COL9A2Q14055 689 aaPredicted RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 TCP11X2Q5H9J9 407 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 FKBP15Q5T1M5 1219 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 KIAA1161Q6NSJ0 714 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 FBXL19Q6PCT2 694 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 LRRC69Q6ZNQ3 347 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 NOP9Q86U38 636 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 DCP2Q8IU60 420 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 TMEM145Q8NBT3 493 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 CHST14Q8NCH0 376 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 ARRDC3Q96B67 414 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 LRIG1Q96JA1 1093 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 FEM1CQ96JP0 617 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 CFAP57Q96MR6 1250 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 HEPHQ9BQS7 1158 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 NAA15Q9BXJ9 866 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 RETREG1Q9H6L5 497 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 ANLNQ9NQW6 1124 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 PPARGC1AQ9UBK2 798 aaKnown RBP11.1□□□□□ -0.63
PVT1-208ENST00000519481 TMEM59LQ9UK28 342 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 HPCAL4Q9UM19 191 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 CA5BQ9Y2D0 317 aa11.1□□□□□ -0.63
PVT1-208ENST00000519481 FAM170AA1A519 330 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 NEMP2A6NFY4 417 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 A6NNZ2 444 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 I6L893 689 aaPredicted RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 RRP8O43159 456 aaKnown RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 GFPT2O94808 682 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 GLDCP23378 1020 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 DGKAP23743 735 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 ACP1P24666 158 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 L1CAMP32004 1257 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 ABCG1P45844 678 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 SERPINH1P50454 418 aaKnown RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 RPS21P63220 83 aaKnown RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 ZNF211Q13398 564 aaPredicted RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 POLD3Q15054 466 aaPredicted RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 SYCP1Q15431 976 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 CDO1Q16878 200 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 ZNF284Q2VY69 593 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 C2CD6Q53TS8 623 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 CARD16Q5EG05 197 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 RWDD4Q6NW29 188 aaKnown RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 DPY19L2P1Q6NXN4 242 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 TRIM72Q6ZMU5 477 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 KANSL1Q7Z3B3 1105 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 RYBPQ8N488 228 aaPredicted RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 IFT43Q96FT9 208 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 NRSN2Q9GZP1 204 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 FZD3Q9NPG1 666 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 TAB2Q9NYJ8 693 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 OR12D3Q9UGF7 316 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 IPO11Q9UI26 975 aaKnown RBP11.09□□□□□ -0.63
PVT1-208ENST00000519481 CLCA2Q9UQC9 943 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 DAAM1Q9Y4D1 1078 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 HS3ST3A1Q9Y663 406 aa11.09□□□□□ -0.63
PVT1-208ENST00000519481 A0A087WV48 116 aa11.08□□□□□ -0.64
PVT1-208ENST00000519481 CXorf51AA0A1B0GTR3 108 aa11.08□□□□□ -0.64
PVT1-208ENST00000519481 NEMP1O14524 444 aa11.08□□□□□ -0.64
PVT1-208ENST00000519481 SIGLEC6O43699 453 aa11.08□□□□□ -0.64
PVT1-208ENST00000519481 ADRB3P13945 408 aa11.08□□□□□ -0.64
PVT1-208ENST00000519481 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms