RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 TMC6Q7Z403 805 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 ADAT2Q7Z6V5 191 aaKnown RBP13□□□□□ -0.33
MCPH1-202ENST00000519221 LUZP1Q86V48 1076 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 TRIM69Q86WT6 500 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 FAM72BQ86X60 149 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
MCPH1-202ENST00000519221 SYN2Q92777 582 aaPredicted RBP13□□□□□ -0.33
MCPH1-202ENST00000519221 TRIM11Q96F44 468 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 EIF3CQ99613 913 aaKnown RBP13□□□□□ -0.33
MCPH1-202ENST00000519221 EPAS1Q99814 870 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 PREBQ9HCU5 417 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 TM7SF3Q9NS93 570 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 DONSONQ9NYP3 566 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 TAS2R14Q9NYV8 317 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 FZD10Q9ULW2 581 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 HPCAL4Q9UM19 191 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 DMTF1Q9Y222 760 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 BZW2Q9Y6E2 419 aaKnown RBP13□□□□□ -0.33
MCPH1-202ENST00000519221 SLCO1B1Q9Y6L6 691 aa13□□□□□ -0.33
MCPH1-202ENST00000519221 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 BNIP3LO60238 219 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 RAMP2O60895 175 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 RTN2O75298 545 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 TRIM16O95361 564 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 CTSLP07711 333 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 MYBL1P10243 752 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 GLDCP23378 1020 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 EPHB2P29323 1055 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 PBX1P40424 430 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 CTSKP43235 329 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 METAP1P53582 386 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 UBASH3AP57075 661 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 C21orf59P57076 290 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 YBEYP58557 167 aaPredicted RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 ARF5P84085 180 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 CNTN1Q12860 1018 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 SUZ12Q15022 739 aaKnown RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 PRPF39Q86UA1 669 aaKnown RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 NAXDQ8IW45 347 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 RTL3Q8N8U3 475 aaKnown RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 FNIP1Q8TF40 1166 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 ARHGEF2Q92974 986 aaKnown RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 PPP1R16AQ96I34 528 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 NCAPGQ9BPX3 1015 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 CATSPERBQ9H7T0 1116 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 DYRK4Q9NR20 520 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 IL36AQ9UHA7 158 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 SNX11Q9Y5W9 270 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 SCINQ9Y6U3 715 aa12.99□□□□□ -0.33
MCPH1-202ENST00000519221 TDRD6O60522 2096 aaKnown RBP12.99□□□□□ -0.33
MCPH1-202ENST00000519221 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 WASH4PA8MWX3 477 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 KPNA3O00505 521 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 DDX3XO00571 662 aaKnown RBP eCLIP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 FGF10O15520 208 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 FLRT2O43155 660 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 SH3BP5O60239 455 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 PCDHGA12O60330 932 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 ZNF821O75541 412 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 RNF8O76064 485 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 PSMA2P25787 234 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 CD38P28907 300 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 ACVRL1P37023 503 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 SIM1P81133 766 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 OGDHQ02218 1023 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 OVGP1Q12889 678 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 POLD3Q15054 466 aaPredicted RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 CARD16Q5EG05 197 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 PIP5KL1Q5T9C9 394 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 NAPEPLDQ6IQ20 393 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 DPY19L3Q6ZPD9 716 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 VPS36Q86VN1 386 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 IQCHQ86VS3 1027 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 CASKIN2Q8WXE0 1202 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 LRIG1Q96JA1 1093 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 SERAC1Q96JX3 654 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 SLC6A18Q96N87 628 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 HEPHQ9BQS7 1158 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 HDAC8Q9BY41 377 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 ISCUQ9H1K1 167 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 EBF2Q9HAK2 575 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 MRPL47Q9HD33 250 aaKnown RBP12.98□□□□□ -0.33
MCPH1-202ENST00000519221 AASDHPPTQ9NRN7 309 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 NDFIP2Q9NV92 336 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 DNAI1Q9UI46 699 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 PCDHB9Q9Y5E1 797 aa12.98□□□□□ -0.33
MCPH1-202ENST00000519221 A0A1W2PR77 199 aa12.97□□□□□ -0.33
MCPH1-202ENST00000519221 YKT6O15498 198 aa12.97□□□□□ -0.33
MCPH1-202ENST00000519221 KDELR3O43731 214 aa12.97□□□□□ -0.33
MCPH1-202ENST00000519221 MAGEC1O60732 1142 aa12.97□□□□□ -0.33
MCPH1-202ENST00000519221 RNGTTO60942 597 aaKnown RBP12.97□□□□□ -0.33
MCPH1-202ENST00000519221 CBFA2T3O75081 653 aa12.97□□□□□ -0.33
MCPH1-202ENST00000519221 CD160O95971 181 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms