RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NCKAP1Q9Y2A7 1128 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ZKSCAN5Q9Y2L8 839 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ZDHHC9Q9Y397 364 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 KIF3AQ9Y496 699 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 TMEM184BQ9Y519 407 aaPredicted RBP3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 PCDHB13Q9Y5F0 798 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 CSNK1G3Q9Y6M4 447 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 STARD9Q9P2P6 4700 aa3.3□□□□□ -1.88
SCARNA13-201ENST00000516672 ANAPC1Q9H1A4 1944 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 UQCRHLA0A096LP55 91 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 IGKV6-21A0A0C4DH24 114 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 SMCO2A6NFE2 343 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 LRRC72A6NJI9 287 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TPP1O14773 563 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TBX3O15119 743 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 AQP9O43315 295 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TSPAN1O60635 241 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 PLEKHA8P1O95397 391 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 LARGE1O95461 756 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 UQCRHP07919 91 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CYP3A4P08684 503 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CPA1P15085 419 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CDC27P30260 824 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 AXLP30530 894 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CLK2P49760 499 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC12A3P55017 1021 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CDH8P55286 799 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 RAB15P59190 212 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 USP46P62068 366 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 PKP1Q13835 747 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TARBP2Q15633 366 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 FAM189A2Q15884 450 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 KYNUQ16719 465 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 ME3Q16798 604 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TTC31Q49AM3 519 aaPredicted RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 WWC2Q6AWC2 1192 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TYW1BQ6NUM6 668 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 MIS18BP1Q6P0N0 1132 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 SASS6Q6UVJ0 657 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 NIPA1Q7RTP0 329 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 SFR1Q86XK3 245 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 FAM129CQ86XR2 697 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 HOMER1Q86YM7 354 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CCNJLQ8IV13 435 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 ZC3H3Q8IXZ2 948 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 ADGRF2Q8IZF7 708 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 GANCQ8TET4 914 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CYB5D2Q8WUJ1 264 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 NR4A3Q92570 626 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 MRPL24Q96A35 216 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 INTS4Q96HW7 963 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CELF6Q96J87 481 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 FAM167AQ96KS9 214 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 TCEANC2Q96MN5 208 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 UROC1Q96N76 676 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 NAP1L4Q99733 375 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CALN1Q9BXU9 219 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 REG4Q9BYZ8 158 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 IKZF4Q9H2S9 585 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 MMP27Q9H306 513 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 GOLGA2P5Q9HBQ8 144 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 ZBTB20Q9HC78 741 aaPredicted RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 FOXD4L1Q9NU39 408 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CRIM1Q9NZV1 1036 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 THAP10Q9P2Z0 257 aaPredicted RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 GULP1Q9UBP9 304 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 SEC14L3Q9UDX4 400 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 LRWD1Q9UFC0 647 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CBLCQ9ULV8 474 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 PCDHGA6Q9Y5G7 932 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 DUSP10Q9Y6W6 482 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 PIKFYVEQ9Y2I7 2098 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CR1P17927 2039 aa3.29□□□□□ -1.88
SCARNA13-201ENST00000516672 CYP3A7-CYP3A51PA0A087WV96 503 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 C2orf78A6NCI8 922 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 SPDYE3A6NKU9 549 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 M0R2N6 131 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 DDX39AO00148 427 aaKnown RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 NPC1O15118 1278 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ERLIN2O94905 339 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CTDNEP1O95476 244 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 NPTXRO95502 500 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ADH1BP00325 375 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CCDC166P0CW27 439 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 HDCP19113 662 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 RXRAP19793 462 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CYP3A7P24462 503 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CA5AP35218 305 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 KIR2DL3P43628 341 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 NAPAP54920 295 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 DLX5P56178 289 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PPP2CBP62714 309 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 PPP2CAP67775 309 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CCT2P78371 535 aaKnown RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ZBTB16Q05516 673 aa3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 ORC2Q13416 577 aaPredicted RBP3.28□□□□□ -1.88
SCARNA13-201ENST00000516672 CUL4AQ13619 759 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms