RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 EPOPA6NHQ4 379 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 RGS16O15492 202 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 USP12O75317 370 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TCEA3O75764 348 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CYBBP04839 570 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 GSTA2P09210 222 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CEBPBP17676 345 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MGAT1P26572 445 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 HOXD9P28356 352 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 STX2P32856 288 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 SLCO1A2P46721 670 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 SESN2P58004 480 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 GPX6P59796 221 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CBX1P83916 185 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TNK2Q07912 1038 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MPP3Q13368 585 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 RFTN1Q14699 578 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 KLHL38Q2WGJ6 581 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MPP7Q5T2T1 576 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 KCTD16Q68DU8 428 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CXorf57Q6NSI4 855 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CASC4Q6P4E1 433 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CCNJLQ8IV13 435 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MFN1Q8IWA4 741 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 AGGF1Q8N302 714 aaeCLIP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 RIBC1Q8N443 379 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 C12orf76Q8N812 135 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 DNAAF3Q8N9W5 541 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 IPMKQ8NFU5 416 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 OR52K2Q8NGK3 314 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 OR52K1Q8NGK4 314 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 SPATA22Q8NHS9 363 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ING5Q8WYH8 240 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TIFAQ96CG3 184 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MRPL38Q96DV4 380 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 STAMBPL1Q96FJ0 436 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PGM2Q96G03 612 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ZNF419Q96HQ0 510 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 EBNA1BP2Q99848 306 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 WDR83Q9BRX9 315 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 NAT9Q9BTE0 207 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CINPQ9BW66 212 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ACE2Q9BYF1 805 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 POLR1EQ9GZS1 481 aaKnown RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PPCSQ9HAB8 311 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 KIF9Q9HAQ2 790 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PDFQ9HBH1 243 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CASS4Q9NQ75 786 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 UBP1Q9NZI7 540 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 BFARQ9NZS9 450 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 UBA2Q9UBT2 640 aaPredicted RBP7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 FETUBQ9UGM5 382 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 SEPT3Q9UH03 358 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CCL26Q9Y258 94 aa7.77□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TCRBV9S1A1TA0A576 114 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 POC1B-GALNT4F8VUJ3 575 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CBX4O00257 560 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 RFXAPO00287 272 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 SLC9A3R1O14745 358 aaPredicted RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CDH16O75309 829 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PMPCBO75439 489 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PAPLNO95428 1278 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PRAMEF12O95522 483 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MT-CYBP00156 380 aaPredicted RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 AGTP01019 485 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TCF3P15923 654 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 GLDCP23378 1020 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ATP5DP30049 168 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CSKP41240 450 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CD86P42081 329 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 NPY2RP49146 381 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 NUMBP49757 651 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 GEMIN4P57678 1058 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MAXP61244 160 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 DSC2Q02487 901 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CDH17Q12864 832 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 USP4Q13107 963 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 OLIG2Q13516 323 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 KCNC3Q14003 757 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ZNF77Q15935 545 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 SKIDA1Q1XH10 827 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 FSCBQ5H9T9 825 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 RARS2Q5T160 578 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 LEKR1Q6ZMV7 388 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 UNC5AQ6ZN44 842 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TPGS1Q6ZTW0 290 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ARID3BQ8IVW6 561 aaPredicted RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 MPP5Q8N3R9 675 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 VN1R2Q8NFZ6 395 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 FAM76AQ8TAV0 307 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 GSDMBQ8TAX9 411 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ITFG1Q8TB96 612 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 FBF1Q8TES7 1133 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 BHMTQ93088 406 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 IMP4Q96G21 291 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 ZSWIM3Q96MP5 696 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 PSKH2Q96QS6 385 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 XPO6Q96QU8 1125 aaKnown RBP7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 CYTH2Q99418 400 aa7.76□□□□□ -1.17
SCARNA20.1-201ENST00000516009 TBL1YQ9BQ87 522 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms