RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DRG1Q9Y295 367 aaKnown RBP21.37■■□□□ 1.01
LSM6-207ENST00000515311 CCDC188H7C350 402 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 KCNK1O00180 336 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 TMCC1O94876 653 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 SLC10A7Q0GE19 358 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 SNX1Q13596 522 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 UBXN2BQ14CS0 331 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 HSF5Q4G112 596 aaPredicted RBP21.36■■□□□ 1.01
LSM6-207ENST00000515311 FNDC3BQ53EP0 1204 aaKnown RBP21.36■■□□□ 1.01
LSM6-207ENST00000515311 MARC1Q5VT66 337 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 LEKR1Q6ZMV7 388 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 TRIM67Q6ZTA4 783 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 USP33Q8TEY7 942 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 MAGOHBQ96A72 148 aaKnown RBP21.36■■□□□ 1.01
LSM6-207ENST00000515311 PSKH2Q96QS6 385 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 VAT1Q99536 393 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 IL12RB2Q99665 862 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 TMEM245Q9H330 911 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 USP29Q9HBJ7 922 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 HAUS2Q9NVX0 235 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 SEPT3Q9UH03 358 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 SLCO3A1Q9UIG8 710 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 ZNF148Q9UQR1 794 aa21.36■■□□□ 1.01
LSM6-207ENST00000515311 MYO18AQ92614 2054 aaKnown RBP21.36■■□□□ 1.01
LSM6-207ENST00000515311 FAM170BA6NMN3 283 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 K7ERQ8 282 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 SMAD6O43541 496 aaKnown RBP21.35■■□□□ 1.01
LSM6-207ENST00000515311 RNF40O75150 1001 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 STK10O94804 968 aaKnown RBP21.35■■□□□ 1.01
LSM6-207ENST00000515311 RBL1P28749 1068 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 STIP1P31948 543 aaKnown RBP21.35■■□□□ 1.01
LSM6-207ENST00000515311 CHRNA3P32297 505 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 HSPA9P38646 679 aaKnown RBP21.35■■□□□ 1.01
LSM6-207ENST00000515311 MMP13P45452 471 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 FNTAP49354 379 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 SEC13P55735 322 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 WASHC5Q12768 1159 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 EMC10Q5UCC4 262 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 SERPINA13PQ6UXR4 307 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 B4GALNT4Q76KP1 1039 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 BBS5Q8N3I7 341 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 PJA1Q8NG27 643 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 FRS2Q8WU20 508 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 RTP4Q96DX8 246 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 TMEM121Q9BTD3 319 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 FOXQ1Q9C009 403 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 ACTL7AQ9Y615 435 aa21.35■■□□□ 1.01
LSM6-207ENST00000515311 CKAP5Q14008 2032 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 RNF103O00237 685 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 KCNN4O15554 427 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 NTSR1P30989 418 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 LMNB2Q03252 620 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 ZBTB17Q13105 803 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 FZD5Q13467 585 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 ZNF235Q14590 738 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 CYTH1Q15438 398 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 DLG2Q15700 870 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 C2orf27AQ580R0 203 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 C22orf39Q6P5X5 142 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 CHPFQ8IZ52 775 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 PCDH20Q8N6Y1 951 aaKnown RBP21.34■■□□□ 1.01
LSM6-207ENST00000515311 IL17RCQ8NAC3 791 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 SPATA4Q8NEY3 305 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 ZNF419Q96HQ0 510 aaPredicted RBP21.34■■□□□ 1.01
LSM6-207ENST00000515311 CINPQ9BW66 212 aaPredicted RBP21.34■■□□□ 1.01
LSM6-207ENST00000515311 C10orf88Q9H8K7 445 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 SEPT10Q9P0V9 454 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 TRHDEQ9UKU6 1024 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 FCF1Q9Y324 198 aaKnown RBP21.34■■□□□ 1.01
LSM6-207ENST00000515311 MTF2Q9Y483 593 aaPredicted RBP21.34■■□□□ 1.01
LSM6-207ENST00000515311 STON1Q9Y6Q2 735 aa21.34■■□□□ 1.01
LSM6-207ENST00000515311 JCHAINP01591 159 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 PTPN3P26045 913 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 TIE1P35590 1138 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 COILP38432 576 aaPredicted RBP21.33■■□□□ 1.01
LSM6-207ENST00000515311 IL12RB1P42701 662 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 RHOAP61586 193 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 HNRNPA1L2Q32P51 320 aaKnown RBP21.33■■□□□ 1.01
LSM6-207ENST00000515311 ACCSLQ4AC99 568 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 TEX44Q53QW1 395 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 SDE2Q6IQ49 451 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 TTC27Q6P3X3 843 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 CCDC137Q6PK04 289 aaKnown RBP21.33■■□□□ 1.01
LSM6-207ENST00000515311 PLPP6Q8IY26 295 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 CCDC105Q8IYK2 499 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 FAM71DQ8N9W8 422 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 MNS1Q8NEH6 495 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 ATL2Q8NHH9 583 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 CLDN23Q96B33 292 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 RUNDC3BQ96NL0 473 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 ACOX2Q99424 681 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 GABRG3Q99928 467 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 MFSD1Q9H3U5 465 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 LMAN1LQ9HAT1 526 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 RBM12Q9NTZ6 932 aaKnown RBP21.33■■□□□ 1.01
LSM6-207ENST00000515311 RBM22Q9NW64 420 aaKnown RBP eCLIP21.33■■□□□ 1.01
LSM6-207ENST00000515311 CACNA2D2Q9NY47 1150 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 LHX3Q9UBR4 397 aa21.33■■□□□ 1.01
LSM6-207ENST00000515311 FEZ2Q9UHY8 353 aaPredicted RBP21.33■■□□□ 1.01
LSM6-207ENST00000515311 TECTAO75443 2155 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms