RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CST6Q15828 149 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 INO80DQ53TQ3 878 aaPredicted RBP8.36□□□□□ -1.07
NEDD4-210ENST00000513957 C9orf64Q5T6V5 341 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 FAM72AQ5TYM5 149 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 LRRC38Q5VT99 294 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 IL31Q6EBC2 164 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 FAM72DQ6L9T8 149 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 C22orf39Q6P5X5 142 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 ZSCAN30Q86W11 494 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 FAM72BQ86X60 149 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 LRRC49Q8IUZ0 686 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 MAP7D3Q8IWC1 876 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 PYROXD2Q8N2H3 581 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 ATP11CQ8NB49 1132 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SLC35G2Q8TBE7 412 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 UBE2Q2Q8WVN8 375 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 PTPRN2Q92932 1015 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
NEDD4-210ENST00000513957 MARVELD3Q96A59 401 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 FAM131CQ96AQ9 280 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 ARHGEF26Q96DR7 871 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF670Q9BS34 389 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 PACSIN1Q9BY11 444 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SGK2Q9HBY8 427 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SPTLC3Q9NUV7 552 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 POLR3BQ9NW08 1133 aaPredicted RBP8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SUSD2Q9UGT4 822 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 PCSK1NQ9UHG2 260 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 DNAI1Q9UI46 699 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 NCKAP1Q9Y2A7 1128 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SNX10Q9Y5X0 201 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 BTNL10A8MVZ5 291 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 TTC34A8MYJ7 566 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SMAPO00193 183 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 KDELR3O43731 214 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 NDUFS2O75306 463 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 ZMPSTE24O75844 475 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 GSRP00390 522 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 PRNPP04156 253 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 RARAP10276 462 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 GOT1P17174 413 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 ERCC2P18074 760 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SDHBP21912 280 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 IL1R2P27930 398 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 NUDT1P36639 197 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 CTSOP43234 321 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 MAGEA1P43355 309 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 STK19P49842 368 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 RPS14P62263 151 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 ARF5P84085 180 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 RPL6Q02878 288 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SRSF5Q13243 272 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SERINC3Q13530 473 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 DPYSQ14117 519 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 RFTN1Q14699 578 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 GRM3Q14832 879 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 DLG2Q15700 870 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 CSRP2Q16527 193 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 ACCSLQ4AC99 568 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 PEAR1Q5VY43 1037 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 LYSMD4Q5XG99 296 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 AFMIDQ63HM1 303 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 ALYREFQ86V81 257 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 CCDC112Q8NEF3 446 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 TMIEQ8NEW7 156 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 OR7D4Q8NG98 312 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF419Q96HQ0 510 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 PPP1R16AQ96I34 528 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 RPL10LQ96L21 214 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 BAG1Q99933 345 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 HINFPQ9BQA5 517 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SPON2Q9BUD6 331 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 OSBPL1AQ9BXW6 950 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 BTBD1Q9H0C5 482 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 PABPC3Q9H361 631 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 LRRC19Q9H756 370 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 OSGEPQ9NPF4 335 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 VPS45Q9NRW7 570 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 NDFIP2Q9NV92 336 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 HAUS2Q9NVX0 235 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 WSB2Q9NYS7 404 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 CWC15Q9P013 229 aaKnown RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 SLCO3A1Q9UIG8 710 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 CYP8B1Q9UNU6 501 aa8.35□□□□□ -1.07
NEDD4-210ENST00000513957 EPN1Q9Y6I3 576 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-210ENST00000513957 CACNA1EQ15878 2313 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 RIF1Q5UIP0 2472 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 BCLAF3A2AJT9 711 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PRR5-ARHGAP8B1AHC4 643 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 RASA4BC9J798 803 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 DCLK1O15075 740 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 RASA4O43374 803 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PSTPIP1O43586 416 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 NRDCO43847 1150 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 SNAP91O60641 907 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms