RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 BMPR1AP36894 532 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ETFBP38117 255 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 NEK3P51956 506 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 SLC7A9P82251 487 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 DBN1Q16643 649 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ANKRD20A4Q4UJ75 823 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 FAM182AQ5T1J6 154 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 GRTP1Q5TC63 336 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 DENND5AQ6IQ26 1287 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 TRMT10BQ6PF06 316 aaKnown RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 CTAGE3PQ8IX95 158 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 LGI2Q8N0V4 545 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 DNAAF3Q8N9W5 541 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 KLHL23Q8NBE8 558 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNF4-220ENST00000513578 BADQ92934 168 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ISL2Q96A47 359 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 GRAMD1AQ96CP6 724 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ZNF419Q96HQ0 510 aaPredicted RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 APOPT1Q96IL0 206 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ZFRQ96KR1 1074 aaKnown RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 FCRL3Q96P31 734 aaPredicted RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 CPNE1Q99829 537 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ACE2Q9BYF1 805 aaPredicted RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 NACA2Q9H009 215 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 RNF38Q9H0F5 515 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 VPS11Q9H270 941 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ZNF334Q9HCZ1 680 aaPredicted RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 NSMCE4AQ9NXX6 385 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ZNF510Q9Y2H8 683 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 RPS6KL1Q9Y6S9 549 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 LOC285095A0A1B0GVY8 99 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 HMX2A2RU54 273 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ERICH4A6NGS2 130 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ZBBXA8MT70 800 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 FOXO6A8MYZ6 492 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 TRIM49D1C9J1S8 452 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 C5orf67F2Z3F1 127 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 J3KR12 359 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 GREM1O60565 184 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 SIN3BO75182 1162 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 RFPL1O75677 317 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 NEBLO76041 1014 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 PAPSS2O95340 614 aaPredicted RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 CXCL14O95715 111 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 FGF19O95750 216 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 IL1BP01584 269 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 RB1P06400 928 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 MMP2P08253 660 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 POU2F2P09086 479 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 CA4P22748 312 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ADRA1DP25100 572 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 HOXD9P28356 352 aaPredicted RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 CDC25CP30307 473 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 CORO1AP31146 461 aaKnown RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 RPA3P35244 121 aaPredicted RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 GP5P40197 560 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 HADHAP40939 763 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ETV4P43268 484 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 MAGEA12P43365 314 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 POLD2P49005 469 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 EPHA5P54756 1037 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 CSE1LP55060 971 aaKnown RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 HNRNPH2P55795 449 aaKnown RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 GNA12Q03113 381 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 SLC10A7Q0GE19 358 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ILF2Q12905 390 aaKnown RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 MTM1Q13496 603 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ITIH4Q14624 930 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 PDK4Q16654 411 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 GKAP1Q5VSY0 366 aaPredicted RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 RNF43Q68DV7 783 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 PDPK2PQ6A1A2 396 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 CASC4Q6P4E1 433 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 PKN3Q6P5Z2 889 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 PACS1Q6VY07 963 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 Q6ZNB5 142 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 MICALCLQ6ZW33 695 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 TFAP2DQ7Z6R9 452 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 YTHDF3Q7Z739 585 aaKnown RBP8.5□□□□□ -1.05
RNF4-220ENST00000513578 CPLX4Q7Z7G2 160 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 TMC8Q8IU68 726 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 DENND1CQ8IV53 801 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 CNTN4Q8IWV2 1026 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 LRRC34Q8IZ02 419 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 C4orf33Q8N1A6 199 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 BBS5Q8N3I7 341 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 CPXM2Q8N436 756 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ANKRD42Q8N9B4 389 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ARRDC2Q8TBH0 407 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 ADAMTS19Q8TE59 1207 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 USP33Q8TEY7 942 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 DYDC1Q8WWB3 177 aa8.5□□□□□ -1.05
RNF4-220ENST00000513578 AUTS2Q8WXX7 1259 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms