RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GBE1Q04446 702 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF33AQ06730 810 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 IL10RBQ08334 325 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 SLC20A2Q08357 652 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ADCY2Q08462 1091 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 KLF1Q13351 362 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ENPP2Q13822 863 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF234Q14588 700 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PDK1Q15118 436 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 NOMO1Q15155 1222 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 LLGL1Q15334 1064 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PTPRNQ16849 979 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 FNDC3BQ53EP0 1204 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CCDC181Q5TID7 509 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 EGFLAMQ63HQ2 1017 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 TIGD7Q6NT04 549 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 AADACL2Q6P093 401 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 SERPINA13PQ6UXR4 307 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 BMP8AQ7Z5Y6 402 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CHPFQ8IZ52 775 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 RPLP0P6Q8NHW5 317 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 USP33Q8TEY7 942 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CYB5D2Q8WUJ1 264 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 MAIP1Q8WWC4 291 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CASKIN2Q8WXE0 1202 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CLDN23Q96B33 292 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 C16orf45Q96MC5 204 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 OLFM3Q96PB7 478 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 OSBPL9Q96SU4 736 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 HERPUD2Q9BSE4 406 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 HEMGNQ9BXL5 484 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 BRD8Q9H0E9 1235 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 CHRDQ9H2X0 955 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 LMAN1LQ9HAT1 526 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PDFQ9HBH1 243 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 THAP10Q9P2Z0 257 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 IPO11Q9UI26 975 aaKnown RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 SNX12Q9UMY4 172 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 SLC8A2Q9UPR5 921 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 ERVW-1Q9UQF0 538 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 MTF2Q9Y483 593 aaPredicted RBP7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 HEY1Q9Y5J3 304 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 PLXNA2O75051 1894 aa7.74□□□□□ -1.17
HMGXB3-204ENST00000513318 TNRC6BQ9UPQ9 1833 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 CUL9Q8IWT3 2517 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 MCF2LO15068 1137 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ATP9BO43861 1147 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 MAFKO60675 156 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 PRAMEF11O60813 436 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ATG13O75143 517 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF189O75820 626 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 DXOO77932 396 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 MAP3K6O95382 1288 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SRCP12931 536 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 PECAM1P16284 738 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 PRLRP16471 622 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 CCNCP24863 283 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 IL12RB1P42701 662 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 CTSOP43234 321 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 NUMBP49757 651 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 STK19P49842 368 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SERPINH1P50454 418 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 OTUD4Q01804 1114 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 PPIDQ08752 370 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SLC10A2Q12908 348 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 XRCC4Q13426 336 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 FZD5Q13467 585 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 RFTN1Q14699 578 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 INO80DQ53TQ3 878 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 C2orf27AQ580R0 203 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 EOGTQ5NDL2 527 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 TMCO4Q5TGY1 634 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 EMC10Q5UCC4 262 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 PAPD7Q5XG87 772 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SDE2Q6IQ49 451 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 C22orf39Q6P5X5 142 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 NPNTQ6UXI9 565 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 LINGO4Q6UY18 593 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SYT10Q6XYQ8 523 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 Q6ZS52 159 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SLC13A5Q86YT5 568 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 TP53INP2Q8IXH6 220 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 BBS5Q8N3I7 341 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 RASGEF1CQ8N431 466 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 FBXL6Q8N531 539 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SH2D3CQ8N5H7 860 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 IL17RCQ8NAC3 791 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ATP11CQ8NB49 1132 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 NETO2Q8NC67 525 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ACTL9Q8TC94 416 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 NSMCE1Q8WV22 266 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SORCS1Q8WY21 1168 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 FATE1Q969F0 183 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 PBXIP1Q96AQ6 731 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 HAUS1Q96CS2 278 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 MYO19Q96H55 970 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 RPL10LQ96L21 214 aaKnown RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 MRGPRX3Q96LB0 322 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF599Q96NL3 588 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 TSGA13Q96PP4 275 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms