RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NBASA2RRP1 2371 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 DOCK4Q8N1I0 1966 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 CCDC187A0A096LP49 1063 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 SPTY2D1-AS1A0A0U1RR47 76 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 CPED1A4D0V7 1026 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 M0QYV0 167 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 EFSO43281 561 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 SUV39H1O43463 412 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 IGLV3-25P01717 112 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 CLDN2P57739 230 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 EIF4EBP2Q13542 120 aaPredicted RBP14.26□□□□□ -0.13
SPCS3-204ENST00000513139 FZD2Q14332 565 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 LINC00303Q3SY05 128 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 TMEM259Q4ZIN3 620 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 SYPL2Q5VXT5 272 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 TMEM270Q6UE05 265 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 PARGQ86W56 976 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 ATP6V0D2Q8N8Y2 350 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 FAM149B1Q96BN6 582 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 BMFQ96LC9 184 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 CCDC114Q96M63 670 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 ZSWIM1Q9BR11 485 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 TRIM4Q9C037 500 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 ZFR2Q9UPR6 939 aaKnown RBP14.26□□□□□ -0.13
SPCS3-204ENST00000513139 HS3ST2Q9Y278 367 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 PCDHGA7Q9Y5G6 932 aa14.26□□□□□ -0.13
SPCS3-204ENST00000513139 SPTAN1Q13813 2472 aaKnown RBP14.26□□□□□ -0.13
SPCS3-204ENST00000513139 USP9YO00507 2555 aaPredicted RBP14.26□□□□□ -0.13
SPCS3-204ENST00000513139 USP9XQ93008 2570 aaPredicted RBP14.26□□□□□ -0.13
SPCS3-204ENST00000513139 KPNA3O00505 521 aaPredicted RBP14.25□□□□□ -0.13
SPCS3-204ENST00000513139 CETN3O15182 167 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 AQP9O43315 295 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 PCDH8O95206 1070 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 GJB6O95452 261 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
SPCS3-204ENST00000513139 CTSLP07711 333 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 SLC2A3P11169 496 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 ITGB6P18564 788 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 CHRNA3P32297 505 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 ACADSBP45954 432 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 RPIAP49247 311 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 NUMBP49757 651 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 NR0B2Q15466 257 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 ZNF542PQ5EBM4 170 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 C6orf132Q5T0Z8 1188 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 TCERG1LQ5VWI1 586 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 KYAT3Q6YP21 454 aaKnown RBP14.25□□□□□ -0.13
SPCS3-204ENST00000513139 USP53Q70EK8 1073 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 PTAR1Q7Z6K3 402 aaPredicted RBP14.25□□□□□ -0.13
SPCS3-204ENST00000513139 GLMNQ92990 594 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 NAT6Q93015 286 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 ARRDC3Q96B67 414 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 SGF29Q96ES7 293 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 LIN37Q96GY3 246 aaPredicted RBP14.25□□□□□ -0.13
SPCS3-204ENST00000513139 IL12RB2Q99665 862 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 HDAC8Q9BY41 377 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 CAAP1Q9H8G2 361 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 DYRK4Q9NR20 520 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 ACSL6Q9UKU0 697 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 OR51B4Q9Y5P0 310 aa14.25□□□□□ -0.13
SPCS3-204ENST00000513139 PMS2P1A4D2B8 440 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 GOLGA6L22H0YM25 854 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 AFPP02771 609 aaKnown RBP14.24□□□□□ -0.13
SPCS3-204ENST00000513139 PRNPP04156 253 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 RABIFP47224 123 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 RPS21P63220 83 aaKnown RBP14.24□□□□□ -0.13
SPCS3-204ENST00000513139 MTA1Q13330 715 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 EIF3IQ13347 325 aaKnown RBP14.24□□□□□ -0.13
SPCS3-204ENST00000513139 FOXR1Q6PIV2 292 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 ERN2Q76MJ5 926 aaKnown RBP14.24□□□□□ -0.13
SPCS3-204ENST00000513139 ZSCAN30Q86W11 494 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 CIR1Q86X95 450 aaPredicted RBP14.24□□□□□ -0.13
SPCS3-204ENST00000513139 OR2A12Q8NGT7 310 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 GPT2Q8TD30 523 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 ARHGAP9Q9BRR9 750 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 BOCQ9BWV1 1114 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 SLC17A9Q9BYT1 436 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 POPDC2Q9HBU9 364 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 VPS28Q9UK41 221 aa14.24□□□□□ -0.13
SPCS3-204ENST00000513139 POM121BA6NF01 834 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 RNF225M0QZC1 329 aaPredicted RBP14.23□□□□□ -0.13
SPCS3-204ENST00000513139 PLD2O14939 933 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 BNIP3LO60238 219 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 SRCP12931 536 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
SPCS3-204ENST00000513139 GPD2P43304 727 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 PDX1P52945 283 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 YWHAZP63104 245 aaKnown RBP14.23□□□□□ -0.13
SPCS3-204ENST00000513139 KRT83P78385 493 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 DPYDQ12882 1025 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 PNOCQ13519 176 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 SPIDRQ14159 915 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 DCAF17Q5H9S7 520 aaPredicted RBP14.23□□□□□ -0.13
SPCS3-204ENST00000513139 PERM1Q5SV97 790 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 SEL1L3Q68CR1 1132 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 OR6B2Q6IFH4 312 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 KIAA1161Q6NSJ0 714 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 FBXL22Q6P050 247 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 OR52K2Q8NGK3 314 aa14.23□□□□□ -0.13
SPCS3-204ENST00000513139 STK32AQ8WU08 396 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms