RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TLX3O43711 291 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 AP1G1O43747 822 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 MT-CO1P00395 513 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 ETFBP38117 255 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 UCNP55089 124 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■■ 33.6
VEGFA-216ENST00000512683 RPS21P63220 83 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 DAB2P98082 770 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 KIAA1161Q6NSJ0 714 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 C14orf80Q86SX3 495 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 FAM114A1Q8IWE2 563 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 PCDH20Q8N6Y1 951 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 MSANTD4Q8NCY6 345 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 OR52K2Q8NGK3 314 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 TPCN2Q8NHX9 752 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 RAB7BQ96AH8 199 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 LENG8Q96PV6 779 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 PSMB7Q99436 277 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 COX16Q9P0S2 106 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 PPARGC1AQ9UBK2 798 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 VPS51Q9UID3 782 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 ADAMTS20P59510 1910 aa12.85□□□□□ -0.35
VEGFA-216ENST00000512683 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
VEGFA-216ENST00000512683 CELSR3Q9NYQ7 3312 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 LZTS3O60299 673 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-216ENST00000512683 GRAP2O75791 330 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 PIAS2O75928 621 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 CNTN5O94779 1100 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 ADCY5O95622 1261 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
VEGFA-216ENST00000512683 ERBB2P04626 1255 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 CTSLP07711 333 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 OR1E1P30953 314 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 RABIFP47224 123 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 LSSP48449 732 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 NEK3P51956 506 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 METAP1P53582 386 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 ERVPABLB-1P60509 514 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 CENPCQ03188 943 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 PTPN20Q4JDL3 420 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 TMEM259Q4ZIN3 620 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-216ENST00000512683 CDCP2Q5VXM1 449 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 HEPHQ9BQS7 1158 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
VEGFA-216ENST00000512683 SLC17A9Q9BYT1 436 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 PIGVQ9NUD9 493 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 DACH1Q9UI36 760 aa12.84□□□□□ -0.35
VEGFA-216ENST00000512683 TP53BP1Q12888 1972 aaPredicted RBP12.83□□□□□ -0.35
VEGFA-216ENST00000512683 A6NNZ2 444 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 TOR1BO14657 336 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 TPP1O14773 563 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 TSPAN6O43657 245 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 BNIP3LO60238 219 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 OPA1O60313 960 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ENDOD1O94919 500 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 PCDH8O95206 1070 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 GIMD1P0DJR0 217 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ITGB7P26010 798 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ITPKBP27987 946 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 L1CAMP32004 1257 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 GEMIN4P57678 1058 aaKnown RBP12.83□□□□□ -0.36
VEGFA-216ENST00000512683 NRG1Q02297 640 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ALFQ53S48 1182 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 CARD16Q5EG05 197 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 TCP11X2Q5H9J9 407 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 KLHDC7AQ5VTJ3 777 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 IGF2-ASQ6U949 168 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 KYAT3Q6YP21 454 aaKnown RBP12.83□□□□□ -0.36
VEGFA-216ENST00000512683 RBM43Q6ZSC3 357 aaKnown RBP12.83□□□□□ -0.36
VEGFA-216ENST00000512683 Q6ZSR6 202 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 BNIPLQ7Z465 357 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ERICH1Q86X53 443 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ARRDC3Q96B67 414 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 TBATAQ96M53 351 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ZYG11BQ9C0D3 744 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 ABCG4Q9H172 646 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 GPR27Q9NS67 375 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 SALL4Q9UJQ4 1053 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 FHOD1Q9Y613 1164 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms