RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 ELK3P41970 407 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 ID4P47928 161 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CLCNKBP51801 687 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 DAOAP59103 153 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 AP1B1Q10567 949 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 ILF2Q12905 390 aaKnown RBP9.7□□□□□ -0.86
MSH3-203ENST00000512531 NME3Q13232 169 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 SEMA5AQ13591 1074 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 PAFAH1B3Q15102 231 aaKnown RBP9.7□□□□□ -0.86
MSH3-203ENST00000512531 ANGPT1Q15389 498 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 TAF5Q15542 800 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 NFE2Q16621 373 aaPredicted RBP9.7□□□□□ -0.86
MSH3-203ENST00000512531 DBN1Q16643 649 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 UPP1Q16831 310 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CCDC142Q17RM4 750 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 LACTB2Q53H82 288 aaPredicted RBP9.7□□□□□ -0.86
MSH3-203ENST00000512531 BRMS1LQ5PSV4 323 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 ARMC3Q5W041 872 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 ALG1LQ6GMV1 187 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 FOXR1Q6PIV2 292 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 TRPM8Q7Z2W7 1104 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 OSTM1Q86WC4 334 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 FAM131BQ86XD5 332 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 ZNF280BQ86YH2 543 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 LRRC49Q8IUZ0 686 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CTAGE3PQ8IX95 158 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 LRRC34Q8IZ02 419 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 PQLC3Q8N755 202 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CCNYQ8ND76 341 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 FLCNQ8NFG4 579 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 ZNF398Q8TD17 642 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 LPPQ93052 612 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 NT5C3BQ969T7 300 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CFAP36Q96G28 342 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 OXCT2Q9BYC2 517 aaPredicted RBP9.7□□□□□ -0.86
MSH3-203ENST00000512531 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 TGIF2Q9GZN2 237 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 VPS11Q9H270 941 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 SMOC2Q9H3U7 446 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CATSPERBQ9H7T0 1116 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 USP29Q9HBJ7 922 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 GOLGA2P5Q9HBQ8 144 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSH3-203ENST00000512531 GPATCH2LQ9NWQ4 482 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSH3-203ENST00000512531 DNAJB4Q9UDY4 337 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 FBXL21Q9UKT6 434 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 MAD1L1Q9Y6D9 718 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 TEX264Q9Y6I9 313 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 CAPN7Q9Y6W3 813 aa9.7□□□□□ -0.86
MSH3-203ENST00000512531 DMDP11532 3685 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 MEIS3P2A8K0S8 358 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 COPEO14579 308 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 NRP1O14786 923 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 FGF10O15520 208 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 CREB3O43889 395 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SNX3O60493 162 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 DDHD2O94830 711 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 GLUD1P00367 558 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 APOEP02649 317 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ATP5BP06576 529 aaKnown RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 SRFP11831 508 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 KRT4P19013 534 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 IL4RP24394 825 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SSTR1P30872 391 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ADRA1BP35368 520 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SCNN1GP51170 649 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 DSG1Q02413 1049 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 CREMQ03060 361 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 YWHAHQ04917 246 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 SOX4Q06945 474 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 ACTN3Q08043 901 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 DSC1Q08554 894 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ADCY1Q08828 1119 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 CCDC15Q0P6D6 951 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SMARCB1Q12824 385 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 PDK4Q16654 411 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 RAB41Q5JT25 222 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ANKRD20A2Q5SQ80 823 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 FNBP1LQ5T0N5 605 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ANKRD20A1Q5TYW2 823 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ANKRD20A3Q5VUR7 823 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 KIAA0319Q5VV43 1072 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 BTBD8Q5XKL5 378 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ATG16L1Q676U5 607 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 RNF43Q68DV7 783 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 NCBP2-AS2Q69YL0 99 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 OVOS1Q6IE37 1185 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 CASC4Q6P4E1 433 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 LRRC8BQ6P9F7 803 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 C6orf89Q6UWU4 347 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 VSTM1Q6UX27 236 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 NPNTQ6UXI9 565 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 RFX8Q6ZV50 586 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 CYP4V2Q6ZWL3 525 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 LINC00523Q86TU6 105 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 COLGALT2Q8IYK4 626 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 GLIS1Q8NBF1 620 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms