RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ETFBP38117 255 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 PBX1P40424 430 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 AIF1P55008 147 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 TAS2R38P59533 333 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 ARF5P84085 180 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 NEK5Q6P3R8 708 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-223ENST00000511081 SLFN11Q7Z7L1 901 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 TRIM69Q86WT6 500 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 BAHD1Q8TBE0 780 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-223ENST00000511081 SNX19Q92543 992 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
CLDND1-223ENST00000511081 VOPP1Q96AW1 172 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 CAMK1GQ96NX5 476 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 CBX8Q9HC52 389 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
CLDND1-223ENST00000511081 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
CLDND1-223ENST00000511081 TBC1D3DA0A087WVF3 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3IA0A087WXS9 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3EA0A087X179 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3KA0A087X1G2 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3FA6NER0 549 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3LB9A6J9 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 RNF103O00237 685 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 CBX4O00257 560 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 PLK4O00444 970 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 WNT9AO14904 365 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 RTN2O75298 545 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TRIM16O95361 564 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 WNT1P04628 370 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3HP0C7X1 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 CD38P28907 300 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 ACVRL1P37023 503 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 OGDHQ02218 1023 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TRIP6Q15654 476 aaKnown RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 PIP5KL1Q5T9C9 394 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3GQ6DHY5 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3CQ6IPX1 549 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 DNAJC24Q6P3W2 148 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 C22orf39Q6P5X5 142 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D3Q8IZP1 549 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 PCDH20Q8N6Y1 951 aaKnown RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 CHST14Q8NCH0 376 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TBC1D31Q96DN5 1066 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 CCDC114Q96M63 670 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 SPON2Q9BUD6 331 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 HDAC8Q9BY41 377 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 HAUS4Q9H6D7 363 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 NOL6Q9H6R4 1146 aaKnown RBP12.39□□□□□ -0.43
CLDND1-223ENST00000511081 ATP13A1Q9HD20 1204 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 PARVAQ9NVD7 372 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 PCOLCE2Q9UKZ9 415 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 WASF2Q9Y6W5 498 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TMEM131Q92545 1883 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
CLDND1-223ENST00000511081 TMEM191CA6NGB0 347 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 H0Y8X5 98 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 DDX3XO00571 662 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 DKK1O94907 266 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 PRNPP04156 253 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 YBEYP58557 167 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 PPP2CBP62714 309 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 PPP2CAP67775 309 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SIM1P81133 766 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SUZ12Q15022 739 aaKnown RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 CARD16Q5EG05 197 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 DPY19L3Q6ZPD9 716 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 RAB44Q7Z6P3 723 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 PRPF39Q86UA1 669 aaKnown RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 UMODL1-AS1Q8N2C9 162 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 PYROXD2Q8N2H3 581 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 ARFGAP1Q8N6T3 406 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 MFSD2AQ8NA29 543 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SYN2Q92777 582 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 ARRDC3Q96B67 414 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SKA1Q96BD8 255 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 MCEEQ96PE7 176 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 ERVMER34-1Q9H9K5 563 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 PREBQ9HCU5 417 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
CLDND1-223ENST00000511081 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
CLDND1-223ENST00000511081 ARID1BQ8NFD5 2236 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-223ENST00000511081 A0A1B0GTQ1 180 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms